DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7457 and bard1

DIOPT Version :9

Sequence 1:NP_001303376.1 Gene:CG7457 / 38865 FlyBaseID:FBgn0035812 Length:1405 Species:Drosophila melanogaster
Sequence 2:XP_021334679.1 Gene:bard1 / 100147913 ZFINID:ZDB-GENE-030131-5883 Length:653 Species:Danio rerio


Alignment Length:496 Identity:113/496 - (22%)
Similarity:185/496 - (37%) Gaps:176/496 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   442 LRRLMLKHNMQVLVENLEADATAKGIDLDQEESVGDDEEESDGGG-------------------- 486
            :|.|..:..:::.|.|.:.: |.:..|:|..:..||::|:...|.                    
Zfish    99 IRSLQERKKLKLEVINKQWN-TGEEADVDAIDETGDEDEKMSSGDDNRKPAKRVFFRLPHSQSEE 162

  Fly   487 ---TAVQQN-TPDWDDDFDL----------ATLTDSD-------ASDLDETE------------- 517
               .:.|:| ||:.:...:.          .:|.|.|       :.:|:|.|             
Zfish   163 TFKPSQQRNLTPNHEKIVEFKDSEQQNSAALSLPDHDQQPIAEISPELNENELLQPSFSRVRKRS 227

  Fly   518 -----------KPRPQRTTRGNRTLVI-------------------------------------- 533
                       .|.|:|.:.|....:|                                      
Zfish   228 SSESLPKQPRITPEPKRRSSGEGAALIEDSSQSLKTFRPTNEKPVLSSLGTHDVLKKSPDVRHKQ 292

  Fly   534 ------KKNNKGETQLHQACISGNLELVRRLIDQGHTVNVRDHAGWLPLHEACNHGYREIVELLL 592
                  |:|:||||.||.|...|::|.||:|:.||...|::|:|||.|||||||.|:..:||.||
Zfish   293 TCPVYMKRNHKGETALHLAASKGDVEGVRKLLAQGADPNLKDNAGWTPLHEACNVGHLGVVEELL 357

  Fly   593 DKGAASAINDKGGTSCDGITPLFDACSNGFLDVAELLLDRGADATVRTDYNETCIAGLDKWRQGA 657
            .:||  .:|..|   ....:||.||..:|.:.|.:||::|||..:|...:             |.
Zfish   358 QQGA--LLNTPG---YQNDSPLHDAIRSGHIAVVKLLVERGASQSVLNIF-------------GL 404

  Fly   658 QLVDGEQAQYA---QLRERLLRTLSKVGICSDKNARPLTNFNAKRISREERGSMSEEEDEEEALH 719
            :.||     ||   :::| :||...:.......:.||       ..|:...|.:....:..:..|
Zfish   405 RPVD-----YALTPEMKE-VLRVAPEASHLITTSLRP-------PASKAAGGVVLIGSELTQTQH 456

  Fly   720 ESNRRSLSHNRSGSEYGAKKSKSSTQPSASKEYRSVMAHLKRPNRLNDDP--PSTSTLNKHKRN- 781
            :      ..||:....|.|::|:         :.|.:.|:..|    |.|  |||.|......| 
Zfish   457 K------QINRAAQLLGGKQAKA---------FSSAVTHVVVP----DVPIMPSTLTTLHGVLNG 502

  Fly   782 ------AFLSEDEVDADNWLID---DVGPERKRKRINSGDL 813
                  ::|| ..:.|.:|:.:   :.|....|.|.|.|.|
Zfish   503 CWILNFSWLS-CSLQAGSWVKESGYEAGDGPLRARANRGSL 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7457NP_001303376.1 TPR_12 21..95 CDD:290160
TPR 68..387 CDD:223533
TPR repeat 163..191 CDD:276809
TPR repeat 196..233 CDD:276809
TPR repeat 238..273 CDD:276809
TPR repeat 316..342 CDD:276809
TPR repeat 347..384 CDD:276809
TPR repeat 389..422 CDD:276809
ANK 535..647 CDD:238125 48/111 (43%)
ANK repeat 539..569 CDD:293786 14/29 (48%)
Ank_2 543..639 CDD:289560 42/95 (44%)
ANK repeat 571..604 CDD:293786 18/32 (56%)
ANK repeat 609..639 CDD:293786 11/29 (38%)
LRR_RI 1063..1360 CDD:238064
leucine-rich repeat 1088..1115 CDD:275381
leucine-rich repeat 1116..1170 CDD:275381
leucine-rich repeat 1199..1225 CDD:275381
leucine-rich repeat 1226..1261 CDD:275381
leucine-rich repeat 1262..1289 CDD:275381
leucine-rich repeat 1290..1315 CDD:275381
bard1XP_021334679.1 ANK 300..410 CDD:238125 51/132 (39%)
ANK repeat 304..334 CDD:293786 14/29 (48%)
ANK repeat 336..367 CDD:293786 18/32 (56%)
ANK repeat 369..400 CDD:293786 12/30 (40%)
BRCT 444..511 CDD:237994 16/85 (19%)
BRCT 544..642 CDD:214602
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586872
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.