DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GBP7 and gbp2

DIOPT Version :10

Sequence 1:NP_997281.2 Gene:GBP7 / 388646 HGNCID:29606 Length:638 Species:Homo sapiens
Sequence 2:NP_001072267.1 Gene:gbp2 / 779720 XenbaseID:XB-GENE-5828806 Length:591 Species:Xenopus tropicalis


Alignment Length:584 Identity:287/584 - (49%)
Similarity:404/584 - (69%) Gaps:9/584 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MASEIHMPGPVCLTEN-TKGHLVVNSEALEILSAITQPVVVVAIVGLYRTGKSYLMNKLAGKNKG 64
            |:::|||..|:||.|| .....|:|:||.:|||.||.|||||||||.||||||||||||||...|
 Frog     1 MSAQIHMKYPICLIENRNSNEFVINTEAEQILSQITDPVVVVAIVGKYRTGKSYLMNKLAGSKTG 65

Human    65 FPLGCTVKSETKGIWMWCVPHPSKPNHTLILLDTEGLGDMEKSDPKSDSWIFALAVLLSSSFVYN 129
            |.||.|::|:||||||||||||.:|:|||:|||||||||:||.|.|:|.|||:|||||||:.|||
 Frog    66 FALGSTIQSKTKGIWMWCVPHPCQPSHTLVLLDTEGLGDVEKGDSKNDGWIFSLAVLLSSNLVYN 130

Human   130 SMGTINHQALEQLHYVTELTELIRAKSCPRPDEVEDSSEFVSFFPDFIWTVRDFTLELKLDGHPI 194
            |||||:||::||||||||||.||:.||.|:..: ::|.||...||.|.|.||||:|.|:|||..:
 Frog   131 SMGTIDHQSMEQLHYVTELTNLIKIKSNPKEGK-DESGEFKRIFPSFTWCVRDFSLILELDGKKV 194

Human   195 TEDEYLENALKLISGKNPQIQNSNKPREWIRHFFPKQKCFVFDRPINDKKLLLH-VEEVREDQLD 258
            |||:||.|:|:|..|.:.:.|:.|.|||.|.|:|...||||||:|.:.:.  || :||::|..|:
 Frog   195 TEDDYLMNSLRLKKGTDRKTQDFNLPRECILHYFHSHKCFVFDQPTSSRN--LHRLEELQEQNLE 257

Human   259 SNFQMQSENFCSYIFTHAKTKTLREGILVTGNRLGMLVETYLDAINSGATPCLENAMAVLAQCEN 323
            ..|..|::.||.||......|||..|:||||..|..|...|::.|.||:.||:|||:..|:..||
 Frog   258 ETFVEQAQKFCGYIHRDGIAKTLPGGLLVTGRMLAHLTSLYIETIMSGSVPCMENAILALSVIEN 322

Human   324 SAAVQRAANHYSQQMAQQV-RFPTDTLQELLDVHAVCEREAIAVFMEYSFKDKSQEFQKKLVDTM 387
            :.|||.|...|...|.:.: ||||:||||.|.:|...|:||:.||::.||.|::|:|||:..:.:
 Frog   323 TGAVQDALAKYETCMNEHLPRFPTETLQEFLHLHQGSEKEALEVFLKRSFNDENQDFQKEFKNLL 387

Human   388 EKKKEDFVLQNEEASAKYCQAELKRLSELLTESISRGTFFVPGGHNIYLEAKKKIEQDYTLVPRK 452
            :.|.::|..:||..|.:.||..:::|||.|.:.||:|.|..||||.::|:.|..|.::|...|.|
 Frog   388 DNKMKEFSERNERESTERCQTIIQKLSESLEQRISQGEFSKPGGHKLFLKEKMTIMEEYNTTPHK 452

Human   453 GVKADEVLQSFLQSQVVIEESILQSDKALTAGEKAIAAKQAKKEAAEKEQELLRQKQKEQQQMME 517
            |:|:.||||.|:.::...|.:|||:|::|||.||.||..||:...||:::::|.:|:|..|:.||
 Frog   453 GLKSLEVLQEFISNKKATEAAILQADESLTAKEKEIAESQAETAEAERQRQILEEKEKYLQESME 517

Human   518 AQERSFQENIAQLKKKMERERENYMRELRKMLSHKMKVLEELLTEGFKEIFESLNEEI---NRL 578
            .|::||:::...|.:|||.:|:..:.|..::::.|::....:||.||:.....|..||   ||:
 Frog   518 NQKKSFEQHEKMLIEKMEADRQKLIAENGRVIAQKLQEQNAMLTAGFQSKVNDLQREIADLNRM 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBP7NP_997281.2 GTPase domain (Globular). /evidence=ECO:0000250|UniProtKB:P32455 1..310 178/310 (57%)
GBP 18..281 CDD:460516 156/263 (59%)
GBP_C 283..579 CDD:460721 120/300 (40%)
Interaction with the CYBA-CYBB complex. /evidence=ECO:0000250|UniProtKB:Q91Z40 311..638 107/272 (39%)
C-terminal tail, required for its localization to cytoplasmic vesicle. /evidence=ECO:0000250|UniProtKB:Q91Z40 590..638
gbp2NP_001072267.1 GBP 20..280 CDD:460516 156/262 (60%)
GBP_C 282..579 CDD:460721 118/296 (40%)
Blue background indicates that the domain is not in the aligned region.

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