DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GBP7 and Gbp3

DIOPT Version :9

Sequence 1:NP_997281.2 Gene:GBP7 / 388646 HGNCID:29606 Length:638 Species:Homo sapiens
Sequence 2:XP_006501782.1 Gene:Gbp3 / 55932 MGIID:1926263 Length:680 Species:Mus musculus


Alignment Length:624 Identity:438/624 - (70%)
Similarity:519/624 - (83%) Gaps:1/624 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     2 ASEIHMPGPVCLTENTKGHLVVNSEALEILSAITQPVVVVAIVGLYRTGKSYLMNKLAGKNKGFP 66
            |||..|..|:||.||.|..|.||.||:.||..|.||:||||||||||||||||||:|||:|.||.
Mouse    56 ASEWTMEAPICLVENWKNQLTVNLEAIRILEQIAQPLVVVAIVGLYRTGKSYLMNRLAGRNHGFS 120

Human    67 LGCTVKSETKGIWMWCVPHPSKPNHTLILLDTEGLGDMEKSDPKSDSWIFALAVLLSSSFVYNSM 131
            ||.||:||||||||||||||:||.|||:|||||||||:||.|||:|||||||||||||:||||||
Mouse   121 LGSTVQSETKGIWMWCVPHPTKPTHTLVLLDTEGLGDVEKGDPKNDSWIFALAVLLSSTFVYNSM 185

Human   132 GTINHQALEQLHYVTELTELIRAKSCPRPDEVEDSSEFVSFFPDFIWTVRDFTLELKLDGHPITE 196
            .|||.|||||||:|||||:||||||.||.|:|:||||||.|||||||.||||.|||||:|.||||
Mouse   186 STINQQALEQLHFVTELTQLIRAKSSPREDKVKDSSEFVGFFPDFIWAVRDFALELKLNGRPITE 250

Human   197 DEYLENALKLISGKNPQIQNSNKPREWIRHFFPKQKCFVFDRPINDKKLLLHVEEVREDQLDSNF 261
            |||||||||||.|.|.::|.||..||.||:|||.:||||||||.:||:|||.:|.|.|:||:.||
Mouse   251 DEYLENALKLIQGDNLKVQQSNMTRECIRYFFPVRKCFVFDRPTSDKRLLLQIENVPENQLERNF 315

Human   262 QMQSENFCSYIFTHAKTKTLREGILVTGNRLGMLVETYLDAINSGATPCLENAMAVLAQCENSAA 326
            |::||.|||||||:.||||||.|::|||||||.||:||::|||||..||||||:..|||.|||.|
Mouse   316 QVESEKFCSYIFTNGKTKTLRGGVIVTGNRLGTLVQTYVNAINSGTVPCLENAVTTLAQRENSIA 380

Human   327 VQRAANHYSQQMAQQVRFPTDTLQELLDVHAVCEREAIAVFMEYSFKDKSQEFQKKLVDTMEKKK 391
            ||:||:|||:||||::|.|||||||||.|||.||:||||||||:||||..||||||||.|:|::|
Mouse   381 VQKAADHYSEQMAQRMRLPTDTLQELLTVHAACEKEAIAVFMEHSFKDDEQEFQKKLVVTIEERK 445

Human   392 EDFVLQNEEASAKYCQAELKRLSELLTESISRGTFFVPGGHNIYLEAKKKIEQDYTLVPRKGVKA 456
            |:|:.|||.||.::|||||:||||.|.:|||.|.|.|||||::||||:||||..|..|.||||||
Mouse   446 EEFIRQNEAASIRHCQAELERLSESLRKSISCGAFSVPGGHSLYLEARKKIELGYQQVLRKGVKA 510

Human   457 DEVLQSFLQSQVVIEESILQSDKALTAGEKAIAAKQAKKEAAEKEQELLRQKQKEQQQMMEAQER 521
            .|||:||||||.::|:||||||||||.||:||||::.|||.||||.|||||:||||:|:||||||
Mouse   511 KEVLKSFLQSQAIMEDSILQSDKALTDGERAIAAERTKKEVAEKELELLRQRQKEQEQVMEAQER 575

Human   522 SFQENIAQLKKKMERERENYMRELRKMLSHKMKVLEELLTEGFKEIFESLNEEINRLKEQIEAAE 586
            ||:||||:|::|||.|:|..:||..|||.||:||.||||.|||:|..:.|..||:.|:|::|.. 
Mouse   576 SFRENIAKLQEKMESEKEMLLREQEKMLEHKLKVQEELLIEGFREKSDMLKNEISHLREEMERT- 639

Human   587 NEEPSVFSQILDVAGSIFIAALPGAAKLVDLGMKILSSL 625
            ..:||:|.||||..|:.||..||||.||..:|:|.|.||
Mouse   640 RRKPSLFGQILDTIGNAFIMILPGAGKLFGVGLKFLGSL 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBP7NP_997281.2 GTPase domain (Globular). /evidence=ECO:0000250 1..310 228/307 (74%)
GBP 18..281 CDD:280433 199/262 (76%)
GBP_C 283..579 CDD:202427 203/295 (69%)
GBP_C 289..579 CDD:293879 200/289 (69%)
coiled coil 548..559 CDD:293879 7/10 (70%)
coiled coil 568..579 CDD:293879 3/10 (30%)
Gbp3XP_006501782.1 GBP 72..335 CDD:308078 199/262 (76%)
GBP_C 337..633 CDD:308475 203/295 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 419 1.000 Domainoid score I10631
eggNOG 1 0.900 - - E1_KOG2037
HGNC 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 875 1.000 Inparanoid score I7057
Isobase 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55037
OrthoDB 1 1.010 - - D1027269at2759
OrthoFinder 1 1.000 - - FOG0000238
OrthoInspector 1 1.000 - - mtm9920
orthoMCL 1 0.900 - - OOG6_100467
Panther 1 1.100 - - O PTHR10751
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X242
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.930

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