DRSC/TRiP Functional Genomics Resources

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Protein Alignment GBP7 and gbp1

DIOPT Version :9

Sequence 1:NP_997281.2 Gene:GBP7 / 388646 HGNCID:29606 Length:638 Species:Homo sapiens
Sequence 2:NP_001016773.1 Gene:gbp1 / 549527 XenbaseID:XB-GENE-6045650 Length:595 Species:Xenopus tropicalis


Alignment Length:589 Identity:289/589 - (49%)
Similarity:408/589 - (69%) Gaps:5/589 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MASEIHMPGPVCLTEN-TKGHLVVNSEALEILSAITQPVVVVAIVGLYRTGKSYLMNKLAGKNKG 64
            |:::|||..|:||.|| .....|:|:||.:|||.||.|||||||||.||||||||||||||:..|
 Frog     1 MSAQIHMKDPICLIENRNSNEFVINTEAEQILSQITDPVVVVAIVGKYRTGKSYLMNKLAGRKTG 65

Human    65 FPLGCTVKSETKGIWMWCVPHPSKPNHTLILLDTEGLGDMEKSDPKSDSWIFALAVLLSSSFVYN 129
            ||||.|::|:||||||||||||.:|:|||:|||||||||:||.|.|:|.|||:|||||||:.|||
 Frog    66 FPLGSTIQSKTKGIWMWCVPHPCQPSHTLVLLDTEGLGDVEKGDSKNDGWIFSLAVLLSSNLVYN 130

Human   130 SMGTINHQALEQLHYVTELTELIRAKSCPRPDEVEDSSEFVSFFPDFIWTVRDFTLELKLDGHPI 194
            |||||::.|:|||.|||||::||:.||.|..:|..:..||...||.|.|.||||:|.|:|||..:
 Frog   131 SMGTIDNHAMEQLQYVTELSKLIKLKSNPEQEEKNEPDEFKRIFPSFTWCVRDFSLILELDGKKV 195

Human   195 TEDEYLENALKLISGKNPQIQNSNKPREWIRHFFPKQKCFVFDRPINDKKLLLH-VEEVREDQLD 258
            ||||||.|:|||..|.:.|.|:.|.|||.|.|:|...||||||:|.:.:.  || :||::|..|:
 Frog   196 TEDEYLMNSLKLKKGTDKQTQDYNLPRECILHYFHSHKCFVFDQPTSSRN--LHRLEELQEQDLE 258

Human   259 SNFQMQSENFCSYIFTHAKTKTLREGILVTGNRLGMLVETYLDAINSGATPCLENAMAVLAQCEN 323
            .:|..|:..||.:|.|....|||..|::|||..|..|...|::.|.||:.||:|||:..|:..||
 Frog   259 EDFVKQTRKFCDHIHTQGVAKTLPGGLIVTGRMLAHLTSLYIETIMSGSVPCMENAVLALSVMEN 323

Human   324 SAAVQRAANHYSQQMAQQV-RFPTDTLQELLDVHAVCEREAIAVFMEYSFKDKSQEFQKKLVDTM 387
            :.|||.|...|...|.:.: ||||:||||.|.:|...|:||:.||::.||.|::|:|||:..:.:
 Frog   324 TGAVQDALAKYETCMKEHLPRFPTETLQEFLHLHQRSEKEALEVFLKRSFNDENQDFQKEFKNLL 388

Human   388 EKKKEDFVLQNEEASAKYCQAELKRLSELLTESISRGTFFVPGGHNIYLEAKKKIEQDYTLVPRK 452
            :.|.::|..:||..|.:.|:..::.|||.|.|.||:|.|..|||||::|.||..|.::|...|||
 Frog   389 DNKMKNFSERNERESTERCEIIIQELSEYLEERISQGEFLKPGGHNLFLVAKMTIMEEYNTTPRK 453

Human   453 GVKADEVLQSFLQSQVVIEESILQSDKALTAGEKAIAAKQAKKEAAEKEQELLRQKQKEQQQMME 517
            |:|:.||||.|:.::..||.:|||:|.:|||.||.||..||:...||:::::|.:.:|..|:.||
 Frog   454 GLKSLEVLQEFISNKKGIEAAILQADVSLTAKEKEIAESQAETAEAERQRQILEENKKYLQESME 518

Human   518 AQERSFQENIAQLKKKMERERENYMRELRKMLSHKMKVLEELLTEGFKEIFESLNEEINRLKEQI 582
            .|::||:::...|.:||:.:|:..:.|..::::.|::....:||.||:....:|..||:.|..:.
 Frog   519 NQKKSFEQHEKMLIEKMDADRQKLIAENERVIAQKLQEQNAMLTAGFQGRVNALQSEIDELYRRN 583

Human   583 EAAE 586
            .|::
 Frog   584 RASK 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBP7NP_997281.2 GTPase domain (Globular). /evidence=ECO:0000250 1..310 178/310 (57%)
GBP 18..281 CDD:280433 157/263 (60%)
GBP_C 283..579 CDD:202427 119/296 (40%)
GBP_C 289..579 CDD:293879 116/290 (40%)
coiled coil 548..559 CDD:293879 1/10 (10%)
coiled coil 568..579 CDD:293879 3/10 (30%)
gbp1NP_001016773.1 P-loop_NTPase 20..281 CDD:304359 157/262 (60%)
GBP_C 283..579 CDD:202427 119/295 (40%)
GBP_C 289..579 CDD:293879 116/289 (40%)
coiled coil 549..560 CDD:293879 1/10 (10%)
coiled coil 569..579 CDD:293879 3/9 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 345 1.000 Domainoid score I7575
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 596 1.000 Inparanoid score I6507
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1027269at2759
OrthoFinder 1 1.000 - - FOG0000238
OrthoInspector 1 1.000 - - otm54712
Panther 1 1.100 - - O PTHR10751
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X242
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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