DRSC/TRiP Functional Genomics Resources

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Protein Alignment GBP7 and gbp1

DIOPT Version :9

Sequence 1:NP_997281.2 Gene:GBP7 / 388646 HGNCID:29606 Length:638 Species:Homo sapiens
Sequence 2:NP_001002343.1 Gene:gbp1 / 436615 ZFINID:ZDB-GENE-040718-32 Length:621 Species:Danio rerio


Alignment Length:633 Identity:266/633 - (42%)
Similarity:385/633 - (60%) Gaps:31/633 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     1 MASEIHMPGPVCLTENTKGHLVVNSEALEILSAITQPVVVVAIVGLYRTGKSYLMNKLAGKNKGF 65
            |:....||.|:||.||..|.|.:..:|::.||.|.:|||||::|||||||||||||:|||:..||
Zfish     1 MSKPTMMPSPICLVENVNGSLSICKDAIDFLSNINEPVVVVSVVGLYRTGKSYLMNRLAGQQTGF 65

Human    66 PLGCTVKSETKGIWMWCVPHPSKPNHTLILLDTEGLGDMEKSDPKSDSWIFALAVLLSSSFVYNS 130
            .||.|::|:||||||||||||.|..|||:|||||||||::|.|.|:|.|||.|||||||:.||||
Zfish    66 ALGNTIESKTKGIWMWCVPHPKKQGHTLVLLDTEGLGDVDKGDSKNDGWIFCLAVLLSSTLVYNS 130

Human   131 MGTINHQALEQLHYVTELTELIRAKSCPRPDEV-EDSSEFVSFFPDFIWTVRDFTLELKLDGHPI 194
            .|||::.|||:|||:|||||.|:.::....||. |:.|:||.|||.|.|.||||||:|.:||..:
Zfish   131 RGTIDNSALEKLHYITELTEQIKIRTAEAADEEDEEDSKFVLFFPSFTWVVRDFTLDLVIDGKNV 195

Human   195 TEDEYLENALKLISGKNPQIQNSNKPREWIRHFFPKQKCFVFDRPINDKKLLLHVEEVREDQLDS 259
            .||:||:.||:|..|.|.:....|.||:.||::||.:|||||..|.:.:| :..:|.::|..|..
Zfish   196 NEDQYLDFALQLRKGNNKKALEYNLPRQCIRNYFPSRKCFVFPSPASPEK-MKQLESLQEKDLVP 259

Human   260 NFQMQSENFCSYIFTHAKTKTLREGILVTGNRLGMLVETYLDAINSGATPCLENAMAVLAQCENS 324
            :|...:..||.:||.::..|||:.|..|||..||.|.:.|:|.|:||..|||:||:..||..||.
Zfish   260 DFLEVTGRFCEHIFRNSVVKTLKGGHKVTGKLLGHLAKIYVDTISSGKVPCLDNAVVALANLENK 324

Human   325 AAVQRAANHYSQQMAQQVR--FPTDTLQELLDVHAVCEREAIAVFMEYSFKDKSQEFQKKLVDTM 387
            .||:.|...|.:.| ::|:  ||.: :.|:...|......|.|.||:.||||:.||:..:|.:.:
Zfish   325 CAVEEAFKVYERGM-EEVKKTFPVN-VDEISSEHQRFSSLANAEFMKRSFKDEKQEYINQLKEKI 387

Human   388 EKKKEDFVLQNEEASAKYCQAELKRLSELLTESISRGTFFVPGGHNIYLEAKKKIEQDYTLVPRK 452
            :......:..|..||.|.|:..||.|...:.:.:..|.:..|||:.:|.:.:..|.:.|...|.|
Zfish   388 DVYYGCLLEDNGLASKKKCEDLLKDLFSEMNKKLQDGVYSQPGGYELYCKDRDVIVEKYRREPNK 452

Human   453 GVKADEVLQSFLQSQVVIEESILQSDKALTAGEKAIAAKQAKKEAAEKEQELLRQKQKEQQQMME 517
            ||.|:.||..||..:.....|||.:|..||..:|.|..::.:....:::.|..::|:.|.::||.
Zfish   453 GVLAEAVLHEFLNERGAEANSILYTDTKLTENDKKIQEEKERNALMQQKCEEEQEKRIESERMMA 517

Human   518 AQERSFQENIAQLKKKMERERENYMRELRKMLSHKMKVLEELLTEGFKEIFESLNEEINRLKEQI 582
            |::....:.|.|:::|.|:|||...:|..|.:..|:|..||:|.:||||..:.|:||||.||::.
Zfish   518 AEKVRQDDQIKQMQEKFEKEREQMQQETEKAIDSKLKEQEEMLNKGFKERADLLSEEINDLKKEK 582

Human   583 EAAENEEPSVFSQILDVAGSIFIAALPGAA----------KLVDLGMK 620
            :....|               :|..:.|||          :::..|||
Zfish   583 KGFMEE---------------YIMPIVGAAAQILPTILDYRVMMKGMK 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBP7NP_997281.2 GTPase domain (Globular). /evidence=ECO:0000250 1..310 165/309 (53%)
GBP 18..281 CDD:280433 143/263 (54%)
GBP_C 283..579 CDD:202427 103/297 (35%)
GBP_C 289..579 CDD:293879 100/291 (34%)
coiled coil 548..559 CDD:293879 3/10 (30%)
coiled coil 568..579 CDD:293879 5/10 (50%)
gbp1NP_001002343.1 P-loop_NTPase 18..281 CDD:328724 143/263 (54%)
GBP_C 283..579 CDD:308475 103/297 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 324 1.000 Domainoid score I6643
eggNOG 1 0.900 - - E1_KOG2037
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55037
OrthoDB 1 1.010 - - D1027269at2759
OrthoFinder 1 1.000 - - FOG0000238
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100467
Panther 1 1.100 - - O PTHR10751
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X242
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.790

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