DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcad and Acox2

DIOPT Version :9

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_001155139.1 Gene:Acox2 / 93732 MGIID:1934852 Length:681 Species:Mus musculus


Alignment Length:456 Identity:96/456 - (21%)
Similarity:171/456 - (37%) Gaps:127/456 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PNGTSFALTEDQLQLQELARK-----------FTREEIIPVAAQYDKSGEYPWPIIKKAWELGLM 83
            ||      ||.:.:::.|.::           .||:|:      |:.:.:..:.:.|.||.||..
Mouse    45 PN------TELRRRVESLIQRDPVFNLKHLYFMTRDEL------YEDAVQKRFHLEKLAWSLGWS 97

  Fly    84 NN---HIPAD--IGGLDLDVFTTCLSAEELAYGCTGIMTALEASGLGQTPVILSGNKEQKKKY-- 141
            .:   .|.||  :.|.:                      .|...|:....:...|:.||..|:  
Mouse    98 EDGPERIYADRVLAGYN----------------------NLNLHGIAMNAIRSLGSDEQIAKWGQ 140

  Fly   142 LGRLLEEPLVAAYCVTEPGAGSDVSGIKTRA--EKKGDEWVINGQKM----WITNGGVANWYFVL 200
            ||:..:  ::..|..||.|.|:.:.|::|.|  :....|:||:...|    |        |...|
Mouse   141 LGKNFQ--IITTYAQTELGHGTYLQGLETEATYDATTQEFVIHSPTMTSIKW--------WPGDL 195

  Fly   201 ARTNPDPK------CPPSK-AFTGFIVERDS-------PGLTPGRKELNMGQRASDTRGITFEDV 251
            .||.....      |..:: ....|||...|       ||:|.|.....||....|...:....|
Mouse   196 GRTVTHAVVLAHLICLGARHGMHAFIVPIRSLEDHTPLPGITVGDIGPKMGFENIDNGFLRLNHV 260

  Fly   252 RVPKENVLIGEGAGFKIAM--GTFDKTRPP--------------VAAGAVGLAQRCLDEALKYAL 300
            |||:||:|    :.|...:  ||:.:...|              :..|.:...|:....|::||:
Mouse   261 RVPRENML----SRFAEVLPDGTYQRLGTPQSNYLGMLVTRVQLLYKGFLPTLQKACTIAVRYAV 321

  Fly   301 ERKTFGVP--------IAYHQAVQFMLADMAIG-----VETSRLAWRLSAWEIDQGRRNSYYASI 352
            .|....:.        :.|....|.:|..:|:.     :.||.|.:..|::. |..:|:  ::.:
Mouse   322 IRHQSRLRPSDPEAKILEYQTQQQKLLPQLAVSYALHFMTTSLLQFFHSSYS-DILKRD--FSLL 383

  Fly   353 AKCHAAD-----MANKIASDAVQI----FGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIIS 408
            .:.||..     |::...:...:|    .||:|::....:..|:..|.....|||.:.:..|.::
Mouse   384 PELHALSTGMKAMSSDFCAQGTEICRRACGGHGYSKLSGLPTLVTQAIASCTYEGENTVLYLQVA 448

  Fly   409 R 409
            |
Mouse   449 R 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 CaiA 35..411 CDD:224871 94/451 (21%)
MCAD 37..414 CDD:173846 94/449 (21%)
Acox2NP_001155139.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
AXO 20..655 CDD:173839 96/456 (21%)
Microbody targeting signal. /evidence=ECO:0000255 679..681
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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