DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and IBR3

DIOPT Version :10

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_187337.2 Gene:IBR3 / 819865 AraportID:AT3G06810 Length:824 Species:Arabidopsis thaliana


Alignment Length:463 Identity:127/463 - (27%)
Similarity:202/463 - (43%) Gaps:78/463 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NKLAAPAL----RQLVSQSRAYAAVSHVSPNGTS-------FALTEDQLQLQELARKFTREEIIP 58
            |:|...||    |:.|......:....|||:..|       |......|:|::...||....|.|
plant   359 NELVESALGYIARENVLPEHPPSVQRDVSPSYESLVDGSGRFIPNRKVLELRQKLIKFMETHIYP 423

  Fly    59 VAAQYDK--SGEYPW---PIIKKAWEL----GLMNNHIPAD-----------------IGGLDLD 97
            :..::.|  ..:..|   |..:|..|:    ||.|..:|.|                 :.|...|
plant   424 MENEFSKLAQSDMRWTVHPQEEKLKEMAKREGLWNLFVPVDSAARARRELAATENKHNLSGKSFD 488

  Fly    98 -VFTTCLSAEELAYGCTGIMTAL--------EASGLGQTPVILS-GNKEQKKKYLGRLLEEPLVA 152
             :|...|:..|..|.|..:..::        .|...|...|||. |||||..::|..|||..:.:
plant   489 QLFGEGLTNLEYGYLCEIMGRSVWAPQVFNCGAPDTGNMEVILRYGNKEQISEWLIPLLEGRIRS 553

  Fly   153 AYCVTEPG-AGSDVSGIKTRAEKKGDEWVINGQKMWITNGGVANWYFVLARTNPDPKC------- 209
            .:.:|||. |.||.:.|:....::||.:||||.|.| |:|.:            ||:|       
plant   554 GFAMTEPQVASSDATNIECSIRRQGDSYVINGTKWW-TSGAM------------DPRCRVLILMG 605

  Fly   210 ------PPSKAFTGFIVERDSPGLTPGRKELNMG--QRASDTRGITFEDVRVPKENVLIGEGAGF 266
                  |..|..:..:|:..:||::..|.....|  ........|:||:|.||.:|:|:|||.||
plant   606 KTDFNAPKHKQQSMILVDMRTPGISVKRPLTVFGFDDAPHGHAEISFENVVVPAKNILLGEGRGF 670

  Fly   267 KIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQFMLADMAIGVETSRL 331
            :||.|.....|.......:|.|:|.::...:.||.|||||..||.|.:....||.:.:.:|.:||
plant   671 EIAQGRLGPGRLHHCMRLIGAAERGMELMAQRALSRKTFGKFIAQHGSFVSDLAKLRVELEGTRL 735

  Fly   332 AWRLSAWEIDQ--GRRNSYYASIAKCHAADMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQ 394
            ....:|..:|:  .::.....::||..|.:||.|:...|:|:.|..|.:|:..:..|...|:..:
plant   736 LVLEAADHLDKFGNKKARGILAMAKVAAPNMALKVLDTAIQVHGAAGVSSDTVLAHLWATARTLR 800

  Fly   395 IYEGTSQI 402
            |.:|..::
plant   801 IADGPDEV 808

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 MCAD 37..414 CDD:173846 116/420 (28%)
IBR3NP_187337.2 PLN02876 1..821 CDD:215473 127/463 (27%)

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