DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and acadl

DIOPT Version :9

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_001039250.1 Gene:acadl / 734116 XenbaseID:XB-GENE-958719 Length:444 Species:Xenopus tropicalis


Alignment Length:385 Identity:128/385 - (33%)
Similarity:216/385 - (56%) Gaps:11/385 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GTSFALTEDQLQLQELARKFTREEIIPVAAQYDKSGEYPWPIIKKAWELGLMNNHIPADIGGLDL 96
            ||....:.|....:|.||||.::|::|..|:::|:|:....:.:||.:.||:....|.:.||:..
 Frog    62 GTRRIFSSDHDIFRESARKFFQQEVVPYHAEWEKAGQVSRNLWEKAGQQGLLGTSTPEEHGGIGG 126

  Fly    97 DVFTTCLSAEELAY-GCTGIMTALEASGLGQTPVILSGNKEQKKKYLGRLLEEPLVAAYCVTEPG 160
            |:.::.:..||..| .|||...:|. |.:....:...|:|.|.:||:.::.....:.|..:||||
 Frog   127 DILSSAIVWEEQMYVNCTGPGFSLH-SDIVMPYISRYGSKSQVEKYIPQMTAGKCIGAIAMTEPG 190

  Fly   161 AGSDVSGIKTRAEKKGDEWVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKAFTGFIVERDSP 225
            ||||:.|::|.|:|.|.:|::||.|::||||.:::...|:|.||.:.: .|:...:.|:|:..:.
 Frog   191 AGSDLQGVRTNAKKDGSDWILNGSKVFITNGWMSDVVIVVAVTNREAR-TPAHGISLFLVDNGTK 254

  Fly   226 GLTPGRKELNMGQRASDTRGITFEDVRVPKENVLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQR 290
            |...|||...:|.:|.||..:.|||||:|.:.:|..|..||...|....:.|..:|..|:...:.
 Frog   255 GFVKGRKLEKIGLKAQDTAELFFEDVRLPADALLGQENKGFYYLMAELPQERLLIADMALASCEF 319

  Fly   291 CLDEALKYALERKTFGVPIAYHQAVQFMLADMAIGVETSRL----AWRLSAWEIDQGRRNSYYAS 351
            ..:|...|..:||.||..||:.|.||..||::...:...|.    ..:|.|    :.|.:|..||
 Frog   320 MFEETRNYVKQRKAFGKTIAHLQTVQHKLAELKTQICIGRTFLDNCLQLHA----EKRLDSATAS 380

  Fly   352 IAKCHAADMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISRNM 411
            :||..|:|:.|.:|:..||:.||.|:..|||:.|...|:::..||.||::|.:.:|:|::
 Frog   381 MAKYWASDLQNSVATQCVQLHGGWGYMWEYPIAKAYVDSRVQPIYGGTNEIMKELIARDI 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 CaiA 35..411 CDD:224871 126/380 (33%)
MCAD 37..414 CDD:173846 126/380 (33%)
acadlNP_001039250.1 LCAD 70..441 CDD:173849 126/377 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D281661at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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