DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and acad9

DIOPT Version :9

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_001038772.1 Gene:acad9 / 724002 ZFINID:ZDB-GENE-060616-196 Length:630 Species:Danio rerio


Alignment Length:396 Identity:136/396 - (34%)
Similarity:205/396 - (51%) Gaps:34/396 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 QLQEL------ARKFTREEIIPVAAQYDKSGEYPWPIIKKAWELGLMNNHIPADIGGLDLDVFTT 101
            :|:||      ..||..|.:  .:|:.|:....|...:....||||....||.:.|||.|     
Zfish    73 ELEELNQFVQPVEKFFNESV--DSAKIDREANIPPETLDGLKELGLFGIQIPEEYGGLGL----- 130

  Fly   102 CLSAEELAYGCTGIMTALEAS---------GLGQTPVILSGNKEQKKKYLGRLLEEPLVAAYCVT 157
                ....|...|.:|:|:.|         .:|...::::|...||.|||.:|.....:||:|:|
Zfish   131 ----SNTMYARLGEITSLDGSIAVTLAAHQAIGLKGILIAGTDAQKAKYLPKLATGEHIAAFCLT 191

  Fly   158 EPGAGSDVSGIKTRA--EKKGDEWVINGQKMWITNGGVANWYFVLARTNPDPKCPPSK-AFTGFI 219
            |||:|||.:.|:.||  .:.|..:::||.|.||:|||.|:...|.|||....|....| ..|.||
Zfish   192 EPGSGSDAASIQLRATLTEDGKHYLLNGTKFWISNGGWADIMTVFARTEVVDKDGQKKDKITAFI 256

  Fly   220 VERDSPGLTPGRKELNMGQRASDTRGITFEDVRVPKENVLIGE-GAGFKIAMGTFDKTRPPVAAG 283
            |||...|:|.|:.|..:|.|.|:|..|||||.:||.||| ||| |.|||:||...:..|..:...
Zfish   257 VERAFGGVTSGKPEDKLGIRGSNTTEITFEDTKVPIENV-IGEVGDGFKVAMNILNNGRFSMGGA 320

  Fly   284 AVGLAQRCLDEALKYALERKTFGVPIAYHQAVQFMLADMAIGVETSRLAWRLSAWEIDQ-GRRN- 346
            ..|:.::.::.:.:||..||.|...::....:|...|.||:.|........|:|..:|: |..: 
Zfish   321 GAGVVKKLIELSAEYAGTRKQFNRRLSEFGMIQDKFATMALNVYVMESMAYLTAGMMDRPGLPDC 385

  Fly   347 SYYASIAKCHAADMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIIS-RN 410
            |..|::.|..:::......|:|:|:.||.||...||.|:.:||.:|.||:|||::|.|:.:: ..
Zfish   386 SLEAAMVKVFSSEGTWICVSEALQVLGGLGFTKNYPYERYLRDCRILQIFEGTNEILRMYVALTG 450

  Fly   411 MYEAAK 416
            |..|.|
Zfish   451 MQHAGK 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 CaiA 35..411 CDD:224871 133/389 (34%)
MCAD 37..414 CDD:173846 134/392 (34%)
acad9NP_001038772.1 CaiA 75..447 CDD:224871 132/383 (34%)
VLCAD 48..455 CDD:173850 134/393 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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