DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcad and acoxl

DIOPT Version :9

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:XP_697559.4 Gene:acoxl / 569104 ZFINID:ZDB-GENE-081107-18 Length:652 Species:Danio rerio


Alignment Length:460 Identity:103/460 - (22%)
Similarity:172/460 - (37%) Gaps:107/460 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ALRQLVSQSRAYAAVSHVSPNGTSFALTEDQLQLQELARKFTREEIIPVAAQYDKSGEYPWPIIK 75
            |.|..:|:|..:        ..:.:..|.||      .|..|.:.:..:..|         |::|
Zfish    28 AFRDAISKSDLF--------QSSCYERTLDQ------NRDLTADRLYHILRQ---------PVMK 69

  Fly    76 -------KAWELGLMNNHIPADIGGLDLDVFTTCLSAEELAYGC-TGIMTALEASGLGQTPVILS 132
                   |..:.|.:|..:.          .|..:.|.::..|. .|::..|....:...     
Zfish    70 EHLKNQLKEKQKGFINKSMS----------ITEVVCAADMNTGVKLGVVCGLYGGAVNNL----- 119

  Fly   133 GNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTRA--EKKGDEWVI-----NGQKMWITN 190
            |:.|||.|:...:.|......:.:||.|.||:|.||.|.|  ::...|::|     :..||:|.|
Zfish   120 GSPEQKIKFYLPVSELQFTGMFAMTERGHGSNVRGIITEARYDQPTQEFIIHTPSEDAHKMYIGN 184

  Fly   191 GGVANWYFVLAR-----TNPDPKCPPSKAFTGFIVE-RDS-----PGLTPGRKELNMGQRASDTR 244
            ....|:..|.|:     .:..|.|        |:|. ||.     ||:|....:...|....|..
Zfish   185 AMKGNFAAVFAQLIINGESQGPHC--------FVVPIRDENGVMWPGVTVSDMKHKEGLHGVDNG 241

  Fly   245 GITFEDVRVPKENVLIGE----------------GAGFKIAMGTFDKTRPPVAAGAVGLAQRCLD 293
            .:.|::||:|:|| |:|:                |..|...:.....||..:...|:...:..|.
Zfish   242 ILIFDNVRIPREN-LLGKFGSVSADGLYSSPALRGNRFNAMLAALTPTRLGLTVQAMAAMKLGLI 305

  Fly   294 EALKYALERKTFG------VPIAYHQAVQFML-----ADMAIGVETSRLAWRLSAWEIDQGR--- 344
            .|:.|:..|:.||      |.|..||.....|     |.:|: ..|||.|..|....:.:|.   
Zfish   306 IAVCYSHSRRQFGPKDQEEVKIMEHQTQNLRLMPHLSAALAL-TFTSRYAADLMDDALCKGEDLQ 369

  Fly   345 -RNSYYASIAKCHAADMANKIA--SDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLI 406
             ..:..|.:|...|......:|  .|..:..||.||..|..:..|..|:.::..:||.:.:...:
Zfish   370 SNRALQALVAGLKAYSTWANVACLQDCRECTGGMGFMMENRIPSLKCDSDVFVTFEGDNMVMLQV 434

  Fly   407 ISRNM 411
            :.|.:
Zfish   435 VVREL 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 CaiA 35..411 CDD:224871 99/434 (23%)
MCAD 37..414 CDD:173846 99/434 (23%)
acoxlXP_697559.4 PLN02636 8..637 CDD:215342 103/460 (22%)
ACAD 44..625 CDD:299127 99/436 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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