DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcad and ACOXL

DIOPT Version :9

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:XP_011509706.1 Gene:ACOXL / 55289 HGNCID:25621 Length:610 Species:Homo sapiens


Alignment Length:401 Identity:103/401 - (25%)
Similarity:158/401 - (39%) Gaps:83/401 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 IKKAWELGLMNNHIPADIGGLDLD-----------VFTTCLSAEELAYG--CTGIMTALEASGLG 125
            :|.|.:|.|:..      .|.||.           |....||..::|.|  | ||:..|....:.
Human     9 VKFAMDLPLLKR------AGQDLAEKTKNFVSRSLVIGEVLSMADMATGVKC-GIIYWLFGGAIR 66

  Fly   126 QTPVILSGNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTRA--EKKGDEWVI-----NG 183
            ..     |:.|...|:...|.|:.....:.:||.|.||:..||:|.|  :....|:||     |.
Human    67 NL-----GSPEHVTKWFQPLQEQKYTGMFAMTERGHGSNARGIQTEATFDLSAQEFVIDTPCENA 126

  Fly   184 QKMWITNGGVANWYFVLARTNPD-----PKCPPSKAFTGFIVE-RDSPG-LTPGRKELNM----G 237
            :||:|.|....|:..|.|:...|     |.|        |||. ||..| |.||...::|    |
Human   127 EKMYIGNAMYGNYAAVFAQLIIDGRSQGPHC--------FIVPVRDENGSLYPGVTAIDMMYKEG 183

  Fly   238 QRASDTRGITFEDVRVPKENVL----------------IGEGAGFKIAMGTFDKTRPPVAAGAVG 286
            ....|...:.|:.||:|:||:|                ..:.|.|...:.....:|..||..|:|
Human   184 LHGVDNGILIFDKVRIPRENLLDKFGSVAPDGQYHSPIRNKSARFNAMLAALTPSRLAVAFQAMG 248

  Fly   287 LAQRCLDEALKYALERKTFG------VPIAYH--QAVQFM--LADMAIGVETSRLAWRLSAWEID 341
            ..:..|..|::|:..|:.||      |.|..|  |.::.|  ||........||.|..|...::.
Human   249 AMKLGLTIAIRYSHSRRQFGPKTKEEVKIIEHQTQTLRLMPHLATALALTFVSRYAGALLDEDVF 313

  Fly   342 QGRR----NSYYASIA--KCHAADMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTS 400
            ||:.    .|..|.:|  |.::.....:...|..:..||.|:..|..:..|..|..::..:||..
Human   314 QGKELVNSRSLQALVAGLKAYSTWENIRCLQDCRECTGGMGYMMENRISGLKCDTDVFATFEGDD 378

  Fly   401 QIQRLIISRNM 411
            .:...::.|.:
Human   379 VVMLQVVGREL 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 CaiA 35..411 CDD:224871 103/399 (26%)
MCAD 37..414 CDD:173846 103/401 (26%)
ACOXLXP_011509706.1 ACAD 2..575 CDD:299127 103/401 (26%)
PLN02636 34..575 CDD:215342 96/370 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.