DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and acox1

DIOPT Version :9

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_001015762.1 Gene:acox1 / 548479 XenbaseID:XB-GENE-1008078 Length:661 Species:Xenopus tropicalis


Alignment Length:350 Identity:79/350 - (22%)
Similarity:130/350 - (37%) Gaps:79/350 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 PVILS-GNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTRA--EKKGDEWVINGQ----- 184
            |.:|: ...||:::.........::..|..||.|.|:.:.|::|.|  :....|:::|..     
 Frog   109 PTLLNQATPEQQERLFMPAWNLEIIGTYAQTEMGHGTHLRGLETTATYDPSTQEFILNSPTVSSI 173

  Fly   185 KMWITNGGV---ANWYFVLARTNPDPKCPPSKAFTGFIV-------ERDSPGLTPGRKELNMGQR 239
            |.|  .||:   :|...|||:.....:|   :....|||       ....||:..|......|..
 Frog   174 KWW--PGGLGKTSNHAVVLAQLYTQGEC---RGLHAFIVPIRHMGTHEPLPGVVVGDIGPKFGFD 233

  Fly   240 ASDTRGITFEDVRVPKENVLI------GEGA-----GFKIAMGTFDKTRPPVAAGAVGLAQRCLD 293
            .:|...:.|:.:|:|:||:|:      .:|.     ..|:..||....|..:...:.....|...
 Frog   234 ETDNGFLKFDKLRIPRENMLMKYAKVEPDGTYVKPLSDKLTYGTMVFIRSMIVGDSARSLSRACT 298

  Fly   294 EALKYALERK----TFGVP---IAYHQAVQFML--------ADMAIGVETSRLAWRLSAWEIDQG 343
            .|::|:..|.    ..|.|   |...|..|:.|        |...:|...|....|:|| ||..|
 Frog   299 IAIRYSAVRHQSEIRAGEPEPQILDFQTQQYKLFPLLATAYAFQFVGSYMSHTYHRISA-EIQAG 362

  Fly   344 RRNSYYASIAKCHAAD---------MANKIASDAVQIFGGNGFN--SEYPVEKLMRDAKIYQ--- 394
            ..|    .:.:.||..         .||....:.....||:|::  |..|        .||.   
 Frog   363 NLN----ELPELHALSAGLKAFTTWAANTGIEECRMACGGHGYSRCSGIP--------DIYVTFT 415

  Fly   395 ---IYEGTSQIQRLIISRNMYEAAK 416
               .|||.:.:..|..:|.:.::.|
 Frog   416 PACTYEGENTVMMLQTARFLVKSYK 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 CaiA 35..411 CDD:224871 78/343 (23%)
MCAD 37..414 CDD:173846 78/346 (23%)
acox1NP_001015762.1 AXO 3..638 CDD:173839 78/349 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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