Protein Alignment Mcad and gcdhb

DIOPT Version :9

• Sequence 1: NP_648149.1
• Gene: Mcad / 38864
• FlyBaseID: FBgn0035811
• Length: 419
• Species: Drosophila melanogaster
• Sequence 2: NP_001006024.1
• Gene: gcdhb / 450003
• ZFINID: ZDB-GENE-041010-117
• Length: 427
• Species: Danio rerio
• Alignment Length: 378
• Identity: 111/378 - (29%)
• Similarity: 182/378 - (48%)
• Gaps: 38/378 - (10%)

  Fly    37 LTEDQLQLQELARKFTREEIIPVAAQYDKSGEYPWPIIKKAWELGLMNNHIPADIGGLDLDVFTT 101
            |||:::.:::..|.:.:|:::|.....:::..:...|:.:..|||::...|..          ..
Zfish    62 LTEEEIMIRDSFRTYCQEKLMPRILMANRNEIFHREIVSEMGELGVLGPTIKG----------YG 116

  Fly   102 CLSAEELAYGC---------TGIMTALEA-SGLGQTPVILSGNKEQKKKYLGRLLEEPLVAAYCV 156
            |.....:|||.         :|..:.:.. |.|...|:...|.:|||:|||.||.:..::..:.:
Zfish   117 CAGTSYVAYGLIAREVERVDSGYRSVMSVQSSLVMHPINAYGTEEQKQKYLPRLAQGEILGCFGL 181

  Fly   157 TEPGAGSDVSGIKTRAE--KKGDEWVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKAFTGFI 219
            |||..|||...::|:|:  .....:.:.|.|.||||..||:...|.|      ||...|. .|||
Zfish   182 TEPNHGSDPGSMETKAKYNSSSHTFTLTGSKTWITNSPVADICVVWA------KCEDGKV-RGFI 239

  Fly   220 VERDSPGLTPGRKELNMGQRASDTRGITFEDVRVPKENVLIGEGAGFKIAMGTFDKTRPPVAAGA 284
            :||...||:..:.|.....|||.|..|..::|.||:|| |:.:.:|.....|..:..|..:|.||
Zfish   240 LERGMKGLSTPKIEGKFSLRASATGMIIMDEVEVPEEN-LLPKASGLAGPFGCLNNARYGIAWGA 303

  Fly   285 VGLAQRCLDEALKYALERKTFGVPIAYHQAVQFMLADM----AIGVETSRLAWRLSAWEIDQGRR 345
            :|.|:.|...|.:|.|:|..||||:|.:|.:|..:|||    .:|:::.....||    ||..:.
Zfish   304 LGAAEFCFHAARQYTLDRIQFGVPLARNQLMQKKMADMLTEITLGLQSCLQLGRL----IDDKKA 364

  Fly   346 NSYYASIAKCHAADMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEG 398
            .....|:.|.::...|..||..|..:.||||...||.:.:.:.:.:....|||
Zfish   365 APEMISLLKRNSCGKALDIARQARDMLGGNGIADEYHIIRHVLNLEAVNTYEG 417

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mcad	NP_648149.1	CaiA	35..411	CDD:224871	111/378 (29%)
		MCAD	37..414	CDD:173846	111/378 (29%)
gcdhb	NP_001006024.1	GCD	50..418	CDD:173840	111/378 (29%)
		CaiA	62..426	CDD:224871	111/378 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D589058at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.920