Protein Alignment Mcad and gcdhb

DIOPT Version :10

• Sequence 1: NP_648149.1
• Gene: Mcad / 38864
• FlyBaseID: FBgn0035811
• Length: 419
• Species: Drosophila melanogaster
• Sequence 2: NP_001429839.1
• Gene: gcdhb / 450003
• ZFINID: ZDB-GENE-041010-117
• Length: 440
• Species: Danio rerio
• Alignment Length: 389
• Identity: 115/389 - (29%)
• Similarity: 187/389 - (48%)
• Gaps: 38/389 - (9%)

  Fly    37 LTEDQLQLQELARKFTREEIIPVAAQYDKSGEYPWPIIKKAWELGLMNNHIPADIGGLDLDVFTT 101
            |||:::.:::..|.:.:|:::|.....:::..:...|:.:..|||::...|..          ..
Zfish    62 LTEEEIMIRDSFRTYCQEKLMPRILMANRNEIFHREIVSEMGELGVLGPTIKG----------YG 116

  Fly   102 CLSAEELAYGC---------TGIMTALEA-SGLGQTPVILSGNKEQKKKYLGRLLEEPLVAAYCV 156
            |.....:|||.         :|..:.:.. |.|...|:...|.:|||:|||.||.:..::..:.:
Zfish   117 CAGTSYVAYGLIAREVERVDSGYRSVMSVQSSLVMHPINAYGTEEQKQKYLPRLAQGEILGCFGL 181

  Fly   157 TEPGAGSDVSGIKTRAEKKGDE--WVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKAFTGFI 219
            |||..|||...::|:|:.....  :.:.|.|.||||..||:...|.|      ||...|. .|||
Zfish   182 TEPNHGSDPGSMETKAKYNSSSRTFTLTGSKTWITNSPVADICVVWA------KCEDGKV-RGFI 239

  Fly   220 VERDSPGLTPGRKELNMGQRASDTRGITFEDVRVPKENVLIGEGAGFKIAMGTFDKTRPPVAAGA 284
            :||...||:..:.|.....|||.|..|..::|.||:|| |:.:.:|.....|..:..|..:|.||
Zfish   240 LERGMKGLSTPKIEGKFSLRASATGMIIMDEVEVPEEN-LLPKASGLAGPFGCLNNARYGIAWGA 303

  Fly   285 VGLAQRCLDEALKYALERKTFGVPIAYHQAVQFMLADM----AIGVETSRLAWRLSAWEIDQGRR 345
            :|.|:.|.....:|.|:|..||||:|.:|.:|..:|||    .:|:::.....||    ||..:.
Zfish   304 LGAAEFCFHATRQYTLDRIQFGVPLARNQLMQKKMADMLTEITLGLQSCLQLGRL----IDDKKA 364

  Fly   346 NSYYASIAKCHAADMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISR 409
            .....|:.|.::...|..||..|..:.||||...||.:.:.:.:.:....||||..|..||:.|
Zfish   365 APEMISLLKRNSCGKALDIARQARDMLGGNGIADEYHIIRHVLNLEAVNTYEGTHDIHALILGR 428

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mcad	NP_648149.1	MCAD	37..414	CDD:173846	115/389 (30%)
gcdhb	NP_001429839.1	None