DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and acox3

DIOPT Version :10

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_998312.2 Gene:acox3 / 406421 ZFINID:ZDB-GENE-040426-2163 Length:708 Species:Danio rerio


Alignment Length:408 Identity:89/408 - (21%)
Similarity:150/408 - (36%) Gaps:100/408 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 TREEIIPVAAQYDKSGEYPWPIIKKAWELGLMNNHIPADIGGLDLDVFTTCLSAEELAYGCTGIM 116
            ||||::          :.||.:|                       |...||...:.:. |....
Zfish   100 TREELM----------QNPWKMI-----------------------VLNDCLGMYDWSL-CAKYF 130

  Fly   117 TALEASGLGQTPVILSGNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTRA--EKKGDEW 179
              |.....|.|  :|:...::..|::..:........:.:||...||:...::|.|  :....|:
Zfish   131 --LNKGMFGAT--VLNTGSQRHLKFVKDIERMMTFGCFSLTELSHGSNTRALRTTAKYDPNTQEF 191

  Fly   180 VIN-----GQKMWITN-GGVANWYFVLART-NPDPKCPPSKAFTGFIVE-RD------SPGLTPG 230
            |||     ..|.|:.| |..|....|.|:. .||.||   .....|||: ||      .||:..|
Zfish   192 VINSPDFEAAKFWVGNLGKTATHSVVFAQLYTPDGKC---HGLHSFIVQVRDPKTLLAMPGVMVG 253

  Fly   231 RKELNMGQRASDTRGITFEDVRVPKENVLIGEG---------AGFKIAMGTFDKTRPPVAAGAVG 286
            .....:||...|.....|.:||:|:||:|...|         :.||.....|..:...::.|.||
Zfish   254 DMGKKLGQNGLDNGFAVFHNVRIPRENLLNKTGDVAPDGQYVSPFKDPNKRFGASLGALSGGRVG 318

  Fly   287 LAQRCL-------DEALKYALERKTFG------VPIAYHQAVQ-----FMLADMAIGVETSRLAW 333
            :.:..|       ..|::::..|:.||      :|:..:|..|     |:.|..|:...|...:.
Zfish   319 ITRMALVNLKLAVTVAVRFSATRRQFGPKEDEEIPVLEYQLQQWRLIPFLAAVYALEHFTKSFSR 383

  Fly   334 RLSAWEI-----DQGRRNSYYASIAKCHAADMANK-----IASDAVQ----IFGGNGFNSEYPVE 384
            ....:::     |:..|.:...  .:.||...|:|     .|...:|    ..||:|:.:...:.
Zfish   384 NFVEFQMGLLMKDKSDRQAELG--REIHALSCASKPLGSWTAQRGIQECREACGGHGYLAMNRLG 446

  Fly   385 KLMRDAKIYQIYEGTSQI 402
            .:..|......|||.:.:
Zfish   447 DMRDDNDPNCTYEGDNNV 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 MCAD 37..414 CDD:173846 89/408 (22%)
acox3NP_998312.2 AXO 27..680 CDD:173839 89/408 (22%)

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