DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and zgc:85777

DIOPT Version :9

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_998100.1 Gene:zgc:85777 / 405871 ZFINID:ZDB-GENE-040426-2210 Length:432 Species:Danio rerio


Alignment Length:410 Identity:138/410 - (33%)
Similarity:208/410 - (50%) Gaps:22/410 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RQLVSQSRAYAAVSHVSPNGTSFALTEDQLQLQELARKFTREEIIPVAAQYDKSGEYP-WPIIKK 76
            |||..::.:....|..:.|......||:...|:...||...:||.|...::::.|.:| ..|.|.
Zfish    28 RQLSEKASSNPKASVSAENIDHILYTEEHFALKASLRKIIDQEINPHVDKWEEEGLFPAHKIFKI 92

  Fly    77 AWELGLMNNHIPADIGGLDLDVFTTCLSAEELA-YGCTGIMTALEASGLGQTPVILS-GNKEQKK 139
            ....|.:..:.|.:.|||.||...:...||||. ..|.||..|:.......||.:.. |:.|.||
Zfish    93 LGSAGFLGVNKPVEYGGLGLDFSYSLAVAEELGNINCGGIPMAIGVQSDMATPALARFGSAELKK 157

  Fly   140 KYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTRAEKKGDEWVINGQKMWITNGGVANWYFVLARTN 204
            ::|...:...:|....|:|.||||||:.|||:|.:||||:||||.|||.|||..|:|..:||.|:
Zfish   158 EFLQPTIMGDVVVCLGVSETGAGSDVASIKTKAVRKGDEYVINGGKMWTTNGTQADWMCLLANTS 222

  Fly   205 PDPK-------CPPSKAFTGFIVERDSPGLTPGRKELNMGQRASDTRGITFEDVRVPKENVLIGE 262
            ..|.       |.|.|.          ||:...||...:|..:|||..:.|:|||||..||:..|
Zfish   223 DGPPHKNKSLICLPMKL----------PGVHIARKINKIGMHSSDTAEVFFDDVRVPCSNVIGQE 277

  Fly   263 GAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQFMLADMAIGVE 327
            |.||...|..|.:.|....|..:.:.::.:.|.::|..:||.|..||.::|.|.|.||::.:.:|
Zfish   278 GMGFTYQMLQFQEERLWGVANILTVMEKVVQETIQYTRQRKIFNQPILHNQVVHFRLAELQMEIE 342

  Fly   328 TSR-LAWRLSAWEIDQGRRNSYYASIAKCHAADMANKIASDAVQIFGGNGFNSEYPVEKLMRDAK 391
            ..| |..|.:|..| :|...:..||:||..|..:|.::|...:|.:||.|:.|:..|.:..||::
Zfish   343 LLRSLLHRATALYI-KGNDVTKLASMAKLKAGRLARELADSCLQYWGGMGYTSDVLVSRFYRDSR 406

  Fly   392 IYQIYEGTSQIQRLIISRNM 411
            :..|..|..::...||.:.|
Zfish   407 LMSIGAGADEVMLSIICKYM 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 CaiA 35..411 CDD:224871 132/386 (34%)
MCAD 37..414 CDD:173846 133/386 (34%)
zgc:85777NP_998100.1 CaiA 52..422 CDD:224871 130/380 (34%)
ACAD 54..426 CDD:299127 131/382 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D589058at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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