DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and CG3902

DIOPT Version :9

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster


Alignment Length:409 Identity:151/409 - (36%)
Similarity:228/409 - (55%) Gaps:18/409 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KLAAPALRQLVSQSRAYAAVSHVSPNGTSFALTEDQLQLQELARKFTREEIIPVAAQYDKSGEYP 70
            ::.|.|.||   ||.|.::.:.:.|..|  .||:|:..::|...|..:|:|.|:..:.|...::.
  Fly    11 RMLANAARQ---QSAAMSSATGLPPPLT--FLTDDEKMMKETVAKLAQEQIQPLVKKMDFEHKFD 70

  Fly    71 WPIIKKAWELGLMNNHIPADIGGLDLDVFTTCLSAEELAYGCTGIMTALEA-----SGLGQTPVI 130
            ..::|..:|.|||...|..::||...:..|..:..|||    :.|..|:.|     :.|..:.:|
  Fly    71 PSVVKAVFENGLMGIEIDTELGGSGCNFMTNIVVVEEL----SKIDPAVAAFVDIHNTLVNSLMI 131

  Fly   131 LSGNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTRAEKKGDEWVINGQKMWITNGGVAN 195
            ..||.|||.|||.:|.:| ...::.:||||||||...:||.|:|.|..:||||.||||:|..||.
  Fly   132 KFGNAEQKAKYLPKLAQE-YAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISNSDVAG 195

  Fly   196 WYFVLARTNPDPKCPPSKAFTGFIVERDSPGLTPGRKELNMGQRASDTRGITFEDVRVPKENVLI 260
            .:.:.|...|:   ...:..|.|||:|::|||...:.|..:|.|||.|..:||::||||:||:|.
  Fly   196 VFLIFANAKPE---DGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILG 257

  Fly   261 GEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQFMLADMAIG 325
            ..|.|:|.|.|..::.|..:||..|||||...|..:.|.||||.||..|...|::|..:|.:|..
  Fly   258 TFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVATE 322

  Fly   326 VETSRLAWRLSAWEIDQGRRNSYYASIAKCHAADMANKIASDAVQIFGGNGFNSEYPVEKLMRDA 390
            :|.:||....:|...:||......|::||.:|:::|.:.|...|...||.||..::|.||..||.
  Fly   323 IEAARLMTYNAARLQEQGVPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDV 387

  Fly   391 KIYQIYEGTSQIQRLIISR 409
            ||..|||||:.:|...|::
  Fly   388 KIGAIYEGTTNMQLSTIAK 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 CaiA 35..411 CDD:224871 142/380 (37%)
MCAD 37..414 CDD:173846 142/378 (38%)
CG3902NP_649069.2 CaiA 37..414 CDD:224871 142/378 (38%)
SCAD_SBCAD 39..410 CDD:173847 140/376 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460758
Domainoid 1 1.000 97 1.000 Domainoid score I372
eggNOG 1 0.900 - - E1_COG1960
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 183 1.000 Inparanoid score I179
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D53071at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9754
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.800

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