DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and acads

DIOPT Version :9

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_989269.1 Gene:acads / 394882 XenbaseID:XB-GENE-855930 Length:409 Species:Xenopus tropicalis


Alignment Length:378 Identity:148/378 - (39%)
Similarity:232/378 - (61%) Gaps:8/378 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LTEDQLQLQELARKFTREEIIPVAAQYDKSGEYPWPIIKKAWELGLMNNHIPADIGGLDLDVFTT 101
            |.|....|::..|:|..:|:.|:||..|:...:|...:::..::||:...:|.::||..||....
 Frog    31 LPETHQMLRDTCREFAEKELQPIAAGLDREHRFPRDQVRQMGQIGLLAVEVPEELGGAGLDYLAY 95

  Fly   102 CLSAEELAYGC--TGIMTALEASGLGQTPVILSGNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSD 164
            .::.||::.||  ||::.::..| |...|::..|::|||::::........:..:.::|||.|||
 Frog    96 SIAVEEISRGCASTGVIMSVNNS-LYLGPILKHGSEEQKRQWISPFCSGDKIGCFALSEPGNGSD 159

  Fly   165 VSGIKTRAEKKGDEWVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKAFTGFIVERDSPGLTP 229
            .....|.|:..|:|||:||.|.||||...|:...|||.|:...|   .|..:.|:||..:|||:.
 Frog   160 AGAASTTAKLDGEEWVLNGTKSWITNAWDASAAVVLATTDKSLK---HKGISAFLVEMPTPGLSL 221

  Fly   230 GRKELNMGQRASDTRGITFEDVRVPKENVLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDE 294
            |:||..:|.|||.|..:.|||.|:|::|:|...|.||||||.|.|..|..:|:.|:|:.|..||.
 Frog   222 GKKEDKLGIRASSTANLIFEDCRIPRQNLLGQPGMGFKIAMQTLDAGRIGIASQALGIGQAALDC 286

  Fly   295 ALKYALERKTFGVPIAYHQAVQFMLADMAIGVETSR-LAWRLSAWEIDQGRRNSYYASIAKCHAA 358
            |:.||.:|..||.||:..||:||.|||||:.:|::| |.|| :|...|..:..:..|::||..|:
 Frog   287 AVDYAEKRLAFGAPISKLQAIQFKLADMALALESARLLTWR-AAMMKDNKKPFTKEAAMAKLAAS 350

  Fly   359 DMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISRNM 411
            :.|.:|:..|:||.||.|:.|:.|.|:..|||:|.:||||||:||||:|:..:
 Frog   351 EAATQISHQAIQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIANQL 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 CaiA 35..411 CDD:224871 148/376 (39%)
MCAD 37..414 CDD:173846 148/378 (39%)
acadsNP_989269.1 SCAD_SBCAD 33..405 CDD:173847 147/376 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D589058at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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