DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and Acox57D-p

DIOPT Version :9

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_001286677.1 Gene:Acox57D-p / 37445 FlyBaseID:FBgn0034628 Length:677 Species:Drosophila melanogaster


Alignment Length:438 Identity:99/438 - (22%)
Similarity:164/438 - (37%) Gaps:111/438 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DQLQLQELARKFTREEIIPVAA---------------QYDKSGEYPWPIIKKA---WELGLMNNH 86
            :.||||..    |.||||..:.               :.:..|:..||.:..|   |.|      
  Fly    59 EMLQLQNK----THEEIIEFSTRGAIEGAKKLRRLQEERNPGGDVYWPNLYDAQVMWGL------ 113

  Fly    87 IPADIGGLDLDVFTTCLSAEELAYGCTGIMTALEASGLGQTPVILSGNKEQKKKYLGRLLEEPLV 151
            :|   ||....|....|            :.||:|.   .||       ||.:::..|:....:.
  Fly   114 VP---GGNPFGVMYVML------------VKALQAQ---CTP-------EQYEEFGKRVELFEIC 153

  Fly   152 AAYCVTEPGAGSDVSGIKTRA--EKKGDEWVIN-----GQKMWITNGGV---ANWYFVLARTNPD 206
            ..|..||.|.|:.:.|::|||  ::|.|::|:|     ..|.|  .||:   :|...|:|:...|
  Fly   154 GTYAQTELGHGTYLRGLETRADFDRKTDQFVLNTPNISSYKWW--PGGLGHSSNHCLVMAQLYID 216

  Fly   207 PKCPPSKAFTGFIVERDS------PGLTPGRKELNMGQRASDTRGITFEDVRVPKENVLIG---- 261
            ..|.....|  ||..||.      ||:..|.....||....:...:..::||:|:..:|:.    
  Fly   217 GDCKGPHMF--FIQVRDEDTHEPLPGVHIGDIGKKMGFIGVNNGFLGLKNVRIPRTRMLMRHAQV 279

  Fly   262 EGAGFKIAMGT-------FDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGV-------PIAYH 312
            :..|..::..|       ..:||..:|.....:.......|.:|:..|:...:       .|..|
  Fly   280 KADGSYVSSPTNVLTYFAMVRTRCVIAKNNAVMLASAATIATRYSAVRRQSPINPNEREPQIMDH 344

  Fly   313 QAVQFML-ADMAIGV---ETSRLAWRL---SAWEIDQGRRNSYYASIAKCHAADMANKI------ 364
            ...|..| .::|..|   :.....|.|   :..:|:.|:    |..:.:.|:...|.|:      
  Fly   345 VTQQMKLFPEIATSVAYRKAGDYLWNLYDVTIEDIENGK----YERLPELHSLSCALKVTCSMDS 405

  Fly   365 ASDAVQI---FGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISR 409
            ||...::   .||:||.:...:..:...|.....|||.:.:..|.|.|
  Fly   406 ASGVEKLRLACGGHGFLTSSNMSSIYVSATAACTYEGENTVLLLQIGR 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 CaiA 35..411 CDD:224871 99/438 (23%)
MCAD 37..414 CDD:173846 99/438 (23%)
Acox57D-pNP_001286677.1 ACAD 14..653 CDD:299127 99/438 (23%)
PLN02443 16..677 CDD:178062 99/438 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460790
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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