DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcad and IVD

DIOPT Version :9

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:XP_016877638.1 Gene:IVD / 3712 HGNCID:6186 Length:516 Species:Homo sapiens


Alignment Length:415 Identity:130/415 - (31%)
Similarity:201/415 - (48%) Gaps:58/415 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PALRQLVSQSRAYAAVSHVSP-----NGTSFALTEDQLQLQELARKFTREEIIPVAAQYDKSGEY 69
            |.|...||| ||::.:    |     ||    |:|:|.||::...||.:|.:.|.|.:.|:|.|:
Human    22 PPLAGFVSQ-RAHSLL----PVDDAING----LSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEF 77

  Fly    70 -----PWPI------------IKKAWE--------------LGLMNNHIPADIGGLDLDVFTTCL 103
                 .|.:            ...||:              ||::....|...||..|......|
Human    78 KNLRVSWEVRAVGGSQGVGLSCTAAWKSSHSFLEFWKQLGNLGVLGITAPVQYGGSGLGYLEHVL 142

  Fly   104 SAEEL--AYGCTGIMTALEASGLGQTPVILSGNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVS 166
            ..||:  |.|..|:..... |.|....::.:||:.||:|||.:|:....:.|..::||.|||||.
Human   143 VMEEISRASGAVGLSYGAH-SNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVV 206

  Fly   167 GIKTRAEKKGDEWVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKAFTGFIVERDSPGLTPGR 231
            .:|.:|||||:.:::||.|.|||||..|:...|.|:|:. ...|.|:..|.||||:..||.:..:
Human   207 SMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDL-AAVPASRGITAFIVEKGMPGFSTSK 270

  Fly   232 KELNMGQRASDTRGITFEDVRVPKENVLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEAL 296
            |...:|.|.|:|..:.|||.::|..|:|..|..|..:.|...|..|..:|.|.:||.|..||..:
Human   271 KLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTI 335

  Fly   297 KYALERKTFGVPIAYHQAVQFMLADMAIGVETSRLAWRLSAWEI----DQGRRNSYYASIAKCHA 357
            .|...|:.||..|.:.|.:|..:|||    .|..:|.|...:.:    |:|...:...:....::
Human   336 PYLHVREAFGQKIGHFQLMQGKMADM----YTRLMACRQYVYNVAKACDEGHCTAKDCAGVILYS 396

  Fly   358 ADMANKIASDAVQIFGGNGFNSEYP 382
            |:.|.::|.|.:|.| |..|::::|
Human   397 AECATQVALDGIQCF-GQTFSAQHP 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 CaiA 35..411 CDD:224871 120/385 (31%)
MCAD 37..414 CDD:173846 120/383 (31%)
IVDXP_016877638.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D589058at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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