DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcad and ivd

DIOPT Version :10

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_958899.1 Gene:ivd / 368775 ZFINID:ZDB-GENE-030616-262 Length:418 Species:Danio rerio


Alignment Length:416 Identity:142/416 - (34%)
Similarity:227/416 - (54%) Gaps:22/416 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ALRQLVSQSRAYAAVS-HVSPNGTSFA---------LTEDQLQLQELARKFTREEIIPVAAQYDK 65
            |:|:.:...:....|| .||..|.:.|         |||:|:||::..::|.:|::.|.|.:.||
Zfish     3 AVRRALRVCQGVVKVSAGVSRRGCAGAVPVDDIVNGLTEEQIQLRQTVQRFFQEKLAPYADEIDK 67

  Fly    66 SGEYP-----WPIIKKAWELGLMNNHIPADIGGLDLDVFTTCLSAEELAYGCTGIMTALEA-SGL 124
            ..|:|     |   |:..:|||:....|.:.||..|......:..||::.....|..:..| |.|
Zfish    68 KNEFPQMREFW---KEMGDLGLLGVTAPVEFGGTGLGYLDHVIIMEEISRVSAAIGLSYGAHSNL 129

  Fly   125 GQTPVILSGNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTRAEKKGDEWVINGQKMWIT 189
            ....::..||::||:||:.:||....|.|..::|..:||||..:|..|:|:||.:|:||.|.|||
Zfish   130 CVNQMVRHGNQKQKEKYMPKLLTGEHVGALAMSESNSGSDVVSMKLTAKKQGDHYVLNGNKFWIT 194

  Fly   190 NGGVANWYFVLARTNPDPKCPPSKAFTGFIVERDSPGLTPGRKELNMGQRASDTRGITFEDVRVP 254
            ||..|:...|.|:|:|:   ..::..|.||||:..||.:..:|...:|.|.|.|..:.|||.::|
Zfish   195 NGSDADVLIVYAKTDPE---AVARGITAFIVEKGMPGFSSAQKLDKLGMRGSSTCELVFEDCKIP 256

  Fly   255 KENVLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQFML 319
            :||||.....|..:.|...|..|..:|:|.||:.|..||.|:.|...|:.||..|.:.|.:|..:
Zfish   257 EENVLGPLNKGVYVLMSGLDLERLVLASGPVGIMQAVLDHAIPYLHVREAFGQKIGHFQLMQGKM 321

  Fly   320 ADMAIGVETSRLAWRLSAWEIDQGRRNSYYASIAKCHAADMANKIASDAVQIFGGNGFNSEYPVE 384
            |||...:.:.|......|...|:|..::...:....:.|:.|.::|.|.:|..||||:.::||:.
Zfish   322 ADMYTRLSSCRQYLYNVARACDKGHFSAKDCAGVILYCAENATQVALDGIQCLGGNGYINDYPMG 386

  Fly   385 KLMRDAKIYQIYEGTSQIQRLIISRN 410
            :.:||||:|:|..|||:|:|:||.|:
Zfish   387 RFLRDAKLYEIGAGTSEIRRIIIGRS 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 MCAD 37..414 CDD:173846 134/380 (35%)
ivdNP_958899.1 IVD 38..415 CDD:173845 134/381 (35%)

Return to query results.
Submit another query.