DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and CG17544

DIOPT Version :10

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_609961.2 Gene:CG17544 / 35213 FlyBaseID:FBgn0032775 Length:693 Species:Drosophila melanogaster


Alignment Length:388 Identity:80/388 - (20%)
Similarity:141/388 - (36%) Gaps:88/388 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 IPADIGGLDLDVFTTCLSAEELAYGCTGIMTALE-ASGLGQ-TPVILSGNKEQKKKYLGRLLEEP 149
            :|.:|..|.....|..|.....|..|.....::: |.|:|. ...|.:...|:.:||:.......
  Fly    87 VPKEIESLSFSAKTKYLMYINEALACYSPSLSVKIALGVGLFNNAIRAMGTEKHQKYIEAAWNRE 151

  Fly   150 LVAAYCVTEPGAGSDVSGIKTRA--EKKGDEWVIN-----GQKMWITNGG--------VANWYFV 199
            ::....:||...||:...|:|.|  :....|:|||     ..|.|:.|.|        .||.|..
  Fly   152 VITCLAITELSHGSNTKSIRTTATYDPTTQEFVINTPDFEAAKCWVGNLGKTATVAMTFANLYTA 216

  Fly   200 LARTNPDPKCPPSKAFTGFIVE-RDS------PGLTPGRKELNMGQRASDTRGITFEDVRVPKEN 257
            ..:.:         ...||::. ||.      ||:..|......|....|...:.|.:.|:|::|
  Fly   217 DGQNH---------GLHGFLIPIRDPKTLLSYPGVLVGDIGEKCGLNGIDNGFVVFTNYRIPRDN 272

  Fly   258 VL------IGEGAGFKI----------AMGTFDKTRPPVAAGAVGLAQRCLDE-------ALKYA 299
            :|      ..||....:          |:.:|       :||.:|:.|...:.       |::|:
  Fly   273 LLNRTSDVTPEGVYESVFTEPGKVLGAALESF-------SAGRIGIMQESANTLCSAAVIAVRYS 330

  Fly   300 LERKTFG-------VPIAYHQAVQFMLADMAIGVETSRLAWR---------LSAWEIDQGRRNSY 348
            ..||.||       :.|..:|..|:.:..........::|..         ::..:.|....:..
  Fly   331 AVRKQFGPERHGEEMAILEYQLHQYRIFPYLAAACVQKIATEELTSTYMEIIARSQADSNGFDVL 395

  Fly   349 YASIAKCHAADMANK-----IASDAVQ----IFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQI 402
            ..:.|:.||...::|     .|.||:|    ..||:|:.....:.::..|......|||.:.:
  Fly   396 TQNAAEIHALISSSKPLITWAARDAIQEAREACGGHGYLQAAKLGQMRTDHDPLCTYEGDNNV 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 MCAD 37..414 CDD:173846 80/388 (21%)
CG17544NP_609961.2 AXO 16..670 CDD:173839 80/388 (21%)

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