DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and CG9527

DIOPT Version :9

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_001137800.1 Gene:CG9527 / 33898 FlyBaseID:FBgn0031813 Length:724 Species:Drosophila melanogaster


Alignment Length:361 Identity:84/361 - (23%)
Similarity:142/361 - (39%) Gaps:77/361 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 GIMTALEASGLGQTPVILSGNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTRA--EKKG 176
            |:.|.:..|      .::|....:..||:.::.:..::.||.:||...|::..|::|||  :.|.
  Fly   153 GLSTGMFPS------TLVSNGSGRLGKYVAKIADNRILGAYALTEISHGTNALGMRTRATYDVKR 211

  Fly   177 DEWVIN-----GQKMWITN-GGVANWYFVLARTN-PDPKCPPSKAFTGFIVERDS------PGLT 228
            .|::|:     ..|.|:.| |.......|.|:.. ||.|....:||  .:..||.      ||:|
  Fly   212 QEFIIHTPDFEAAKCWVGNLGKTCTHAIVYAQLYVPDDKHQGLQAF--LVPIRDERTLLPFPGVT 274

  Fly   229 PGRKELNMGQRASDTRGITFEDVRVPKENVLIGEGAGFKIAMGTF------DKTRPPVAAGAVGL 287
            .|.....:|....|...:.|...|:||.|:|  ...|...|.|.:      ::.|...:.||:.:
  Fly   275 VGDMGEKIGLNGIDNGFVMFNQYRIPKANLL--SKTGDIDAQGNYTSKIKDERKRLGASLGALSV 337

  Fly   288 AQ------------RCLDEALKYALERKTFGV-------PIAYHQAVQFML------------AD 321
            .:            :.:..|.:||..|:.||.       |:..:|:.|:.|            |.
  Fly   338 GRVNITAITYVALSKAVTIATRYAASRRQFGPTNSPAEWPVIEYQSQQYRLIPHLATTIALRVAT 402

  Fly   322 MAIGVETSRLAWR-LSAWEIDQGRRNSYYASIAKCHAADMANKIASDAVQ----IFGGNGFNSEY 381
            :.||.|...|..: .:..:..|.....:..|.|....|..|   |.|.:|    ..||:|:....
  Fly   403 LWIGKENVDLTMKGFTGEDTSQAGMEIHAISSALKPVATWA---ARDGIQECREACGGHGYLKSS 464

  Fly   382 PVEKLMRDAKIYQIYEGTSQ--IQR-----LIISRN 410
            .:.:|..|......|||.:.  ||:     :.:.||
  Fly   465 GLGELRNDNDANCTYEGENNTLIQQASNWLISLQRN 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 CaiA 35..411 CDD:224871 84/361 (23%)
MCAD 37..414 CDD:173846 84/361 (23%)
CG9527NP_001137800.1 ACAD 52..694 CDD:299127 84/361 (23%)
PLN02312 56..682 CDD:215178 84/361 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460793
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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