DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and Acad9

DIOPT Version :10

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_861433.2 Gene:Acad9 / 294973 RGDID:727973 Length:625 Species:Rattus norvegicus


Alignment Length:415 Identity:143/415 - (34%)
Similarity:221/415 - (53%) Gaps:36/415 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 QSRAYAA---VSHVSPNGTSFALTE-DQLQLQEL------ARKFTREEIIPVAAQYDKSGEYPWP 72
            ||.::|.   :.|:...|. |...| .|.:|.|:      ..||..||:  .:.:.|:.|:.|..
  Rat    39 QSCSFAKELFLGHIQQKGV-FPFPEVSQEELSEINQFVGPLEKFFNEEV--DSRKIDQEGKIPAD 100

  Fly    73 IIKKAWELGLMNNHIPADIGGLDLDVFTTCLSAEELAYGCTGIMTALEAS---------GLGQTP 128
            .:.|...|||....:|.:.|||.|         ....|...|.:.:::||         .:|...
  Rat   101 TLAKLKSLGLFGIQVPEEYGGLGL---------SNTMYARLGEIISMDASITVTLAAHQAIGLKG 156

  Fly   129 VILSGNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTRAEKKGDE--WVINGQKMWITNG 191
            :||.||:|||.|||.:|.....:||:|:|||.:|||.:.|:|||....|:  :|:||.|:|||||
  Rat   157 IILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLSEDKKYFVLNGSKVWITNG 221

  Fly   192 GVANWYFVLARTN-PDPKCPPSKAFTGFIVERDSPGLTPGRKELNMGQRASDTRGITFEDVRVPK 255
            |:||.:.|.|:|. .|.........|.||||||..|:|.|:.|..:|.|.|:|..:.||:.|||.
  Rat   222 GLANIFTVFAKTEVVDSDGSIKDKMTAFIVERDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPV 286

  Fly   256 ENVLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQFMLA 320
            ||||...|.|||:||...:..|..:.:...|:.::.:::..:||..||.|...::....:|...|
  Rat   287 ENVLGEVGGGFKVAMNILNSGRFSMGSAVAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFA 351

  Fly   321 DMAIGVETSRLAWRLSAWEIDQ-GRRN-SYYASIAKCHAADMANKIASDAVQIFGGNGFNSEYPV 383
            .||...........|::..:|| |..: |..|::.|..:::.|.:..|:|:||.||:|:..:||.
  Rat   352 LMAQKAYVMESMAYLTSGMLDQPGFPDCSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPY 416

  Fly   384 EKLMRDAKIYQIYEGTSQIQRLIIS 408
            |:::|||:|..|:|||::|.||.|:
  Rat   417 ERMLRDARILLIFEGTNEILRLFIA 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 MCAD 37..414 CDD:173846 137/393 (35%)
Acad9NP_861433.2 VLCAD 42..449 CDD:173850 141/412 (34%)

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