DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and acdh-10

DIOPT Version :9

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_001294824.1 Gene:acdh-10 / 24104866 WormBaseID:WBGene00020366 Length:417 Species:Caenorhabditis elegans


Alignment Length:406 Identity:248/406 - (61%)
Similarity:305/406 - (75%) Gaps:4/406 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LNKLAAPALRQLVSQSRAYAAVSHVSPNGTSFALTEDQLQLQELARKFTREEIIPVAAQYDKSGE 68
            |:::|..:|    ..||:...|........||.|:|.|.::|:.|.||:::.::|.||::|:|||
 Worm     2 LSRIATSSL----GLSRSATGVIATQSRQISFDLSETQKEIQDAALKFSKDVLVPNAAKFDESGE 62

  Fly    69 YPWPIIKKAWELGLMNNHIPADIGGLDLDVFTTCLSAEELAYGCTGIMTALEASGLGQTPVILSG 133
            :||.|:::|..|||||..||...||..:....|.|..|.|:||||||...:....|...||.:||
 Worm    63 FPWEIVRQAHSLGLMNPQIPEKYGGPGMTTLETALIVEALSYGCTGIQLGIMGPSLAIAPVYISG 127

  Fly   134 NKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTRAEKKGDEWVINGQKMWITNGGVANWYF 198
            |:||||||||.|..||::|:||||||||||||:|:||:.||||||::|||.|.|||.||.|.|:|
 Worm   128 NEEQKKKYLGALAAEPIIASYCVTEPGAGSDVNGVKTKCEKKGDEYIINGSKAWITGGGHAKWFF 192

  Fly   199 VLARTNPDPKCPPSKAFTGFIVERDSPGLTPGRKELNMGQRASDTRGITFEDVRVPKENVLIGEG 263
            ||||::|:||.|..||||.|||:.|:||:|.|:||.|||||.||||.|||||||||.||||...|
 Worm   193 VLARSDPNPKTPAGKAFTAFIVDGDTPGITRGKKEKNMGQRCSDTRVITFEDVRVPAENVLGAPG 257

  Fly   264 AGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQFMLADMAIGVET 328
            ||||:||..||.|||.|||||:||:.|||||:.|||||||.||..||.||||||||||||:.:|.
 Worm   258 AGFKVAMEAFDMTRPGVAAGALGLSWRCLDESAKYALERKAFGTVIANHQAVQFMLADMAVNLEL 322

  Fly   329 SRLAWRLSAWEIDQGRRNSYYASIAKCHAADMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIY 393
            :||....||.::|...|:||.||||||.|||.||:.|::||||||||||||||||||||||||||
 Worm   323 ARLITYKSANDVDNKVRSSYNASIAKCFAADTANQAATNAVQIFGGNGFNSEYPVEKLMRDAKIY 387

  Fly   394 QIYEGTSQIQRLIISR 409
            |||||||||||::|||
 Worm   388 QIYEGTSQIQRIVISR 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 CaiA 35..411 CDD:224871 241/375 (64%)
MCAD 37..414 CDD:173846 240/373 (64%)
acdh-10NP_001294824.1 CaiA 27..411 CDD:224871 242/377 (64%)
ACAD 31..408 CDD:299127 240/373 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 212 1.000 Domainoid score I1615
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 493 1.000 Inparanoid score I770
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56625
OrthoDB 1 1.010 - - D281661at33208
OrthoFinder 1 1.000 - - FOG0005377
OrthoInspector 1 1.000 - - otm14066
orthoMCL 1 0.900 - - OOG6_101120
Panther 1 1.100 - - LDO PTHR48083
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3931
SonicParanoid 1 1.000 - - X3813
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.910

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