DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and Acad9

DIOPT Version :9

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_766266.3 Gene:Acad9 / 229211 MGIID:1914272 Length:625 Species:Mus musculus


Alignment Length:437 Identity:145/437 - (33%)
Similarity:224/437 - (51%) Gaps:51/437 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 AAPALRQLVSQSRAYAAVSHVSPNGTSFAL----------------TEDQLQLQEL------ARK 50
            |:..||:..::.|..    |.|....|||.                ...|.:|.|:      ..|
Mouse    20 ASRVLREFTARRRPL----HTSLQSCSFAKELFLGNIEQKGVFPFPEVSQHELSEINQFVGPLEK 80

  Fly    51 FTREEIIPVAAQYDKSGEYPWPIIKKAWELGLMNNHIPADIGGLDLDVFTTCLSAEELAYGCTGI 115
            |..||:  .:.:.|:.|:.|...::|...|||....:|.:.|||.|         ....|...|.
Mouse    81 FFTEEV--DSRKIDQEGKIPVDTLEKLKSLGLFGIQVPEEYGGLGL---------SNTMYARLGE 134

  Fly   116 MTALEAS---------GLGQTPVILSGNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTR 171
            :.:|:||         .:|...:||.||:|||.|||.:|.....:||:|:|||.:|||.:.|:||
Mouse   135 IISLDASITVTLAAHQAIGLKGIILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTR 199

  Fly   172 AEKKGDE--WVINGQKMWITNGGVANWYFVLARTN-PDPKCPPSKAFTGFIVERDSPGLTPGRKE 233
            |....|:  :::||.|:||||||:||.:.|.|:|. .|.....:...|.||||||..|:|.|:.|
Mouse   200 ATLSEDKKYFILNGSKVWITNGGLANIFTVFAKTEVVDSDGSKTDKMTAFIVERDFGGITNGKPE 264

  Fly   234 LNMGQRASDTRGITFEDVRVPKENVLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKY 298
            ..:|.|.|:|..:.||:.|||.||||...|.|||:||...:..|..:.:...|:.::.::...:|
Mouse   265 DKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNILNSGRFSMGSAVAGMLKKLIELTAEY 329

  Fly   299 ALERKTFGVPIAYHQAVQFMLADMAIGVETSRLAWRLSAWEIDQ-GRRN-SYYASIAKCHAADMA 361
            |..||.|...::....:|...|.||...........|::..:|| |..: |..|::.|..:::.|
Mouse   330 ACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQPGFPDCSIEAAMVKVFSSEAA 394

  Fly   362 NKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIIS 408
            .:..|:|:||.||:|:..:||.|:::|||:|..|:|||::|.||.|:
Mouse   395 WQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILRLFIA 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 CaiA 35..411 CDD:224871 138/410 (34%)
MCAD 37..414 CDD:173846 136/408 (33%)
Acad9NP_766266.3 VLCAD 42..449 CDD:173850 139/411 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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