DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and acdh-7

DIOPT Version :9

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_510789.1 Gene:acdh-7 / 181758 WormBaseID:WBGene00020812 Length:412 Species:Caenorhabditis elegans


Alignment Length:399 Identity:238/399 - (59%)
Similarity:297/399 - (74%) Gaps:0/399 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RQLVSQSRAYAAVSHVSPNGTSFALTEDQLQLQELARKFTREEIIPVAAQYDKSGEYPWPIIKKA 77
            |.|...:|.::..:.....|..|.||.||.:.:...|||..:|:||||.:|||:.||||.|||||
 Worm     4 RNLTKCTRLFSTTNKAMSTGMDFQLTADQAEFRANVRKFVADEVIPVAGEYDKTMEYPWEIIKKA 68

  Fly    78 WELGLMNNHIPADIGGLDLDVFTTCLSAEELAYGCTGIMTALEASGLGQTPVILSGNKEQKKKYL 142
            ...|.:...||...|||.:|:.:.|:.:||:||||:||.||:.|:.|..||:||..|.:.||::|
 Worm    69 HAQGYLIADIPEAYGGLGVDMVSNCIISEEMAYGCSGIATAIMANDLALTPLILCANDDIKKRFL 133

  Fly   143 GRLLEEPLVAAYCVTEPGAGSDVSGIKTRAEKKGDEWVINGQKMWITNGGVANWYFVLARTNPDP 207
            ||:::.|.||:|.||||||||||:|:||:.||||||:::||.||||||.|.|||:|||||::|||
 Worm   134 GRMIDNPFVASYAVTEPGAGSDVAGVKTKCEKKGDEYILNGSKMWITNAGHANWFFVLARSDPDP 198

  Fly   208 KCPPSKAFTGFIVERDSPGLTPGRKELNMGQRASDTRGITFEDVRVPKENVLIGEGAGFKIAMGT 272
            |....||||.|:||.|:||||.||||:|||||.||||||||||||||..||:...|.|||:||.|
 Worm   199 KTAAGKAFTAFVVEGDTPGLTRGRKEINMGQRCSDTRGITFEDVRVPAANVVGAPGEGFKVAMKT 263

  Fly   273 FDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQFMLADMAIGVETSRLAWRLSA 337
            ||||||.|||.|.|:|.||||.|.:|:||||.||..||.||.|.|:||:|||..|.:||....|.
 Worm   264 FDKTRPTVAALATGVAYRCLDVATQYSLERKAFGTQIANHQGVSFLLAEMAINCELARLMTYKSG 328

  Fly   338 WEIDQGRRNSYYASIAKCHAADMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQI 402
            .|:|.||..||||||||..|:|.||:.|::|||||||.|||:|||.|||||||||:|||||||||
 Worm   329 AEVDAGRPGSYYASIAKLFASDTANQAATNAVQIFGGAGFNTEYPAEKLMRDAKIFQIYEGTSQI 393

  Fly   403 QRLIISRNM 411
            ||::|:|.:
 Worm   394 QRMVIARQL 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 CaiA 35..411 CDD:224871 234/375 (62%)
MCAD 37..414 CDD:173846 233/375 (62%)
acdh-7NP_510789.1 CaiA 24..408 CDD:224871 234/379 (62%)
ACAD 28..405 CDD:299127 233/375 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163595
Domainoid 1 1.000 163 1.000 Domainoid score I2403
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H3
Inparanoid 1 1.050 493 1.000 Inparanoid score I770
Isobase 1 0.950 - 0 Normalized mean entropy S2116
OMA 1 1.010 - - QHG56625
OrthoDB 1 1.010 - - D281661at33208
OrthoFinder 1 1.000 - - FOG0005377
OrthoInspector 1 1.000 - - otm14066
orthoMCL 1 0.900 - - OOG6_101120
Panther 1 1.100 - - O PTHR48083
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3931
SonicParanoid 1 1.000 - - X3813
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.790

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