DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and acdh-8

DIOPT Version :9

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_495142.1 Gene:acdh-8 / 173979 WormBaseID:WBGene00019406 Length:412 Species:Caenorhabditis elegans


Alignment Length:380 Identity:236/380 - (62%)
Similarity:288/380 - (75%) Gaps:0/380 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SFALTEDQLQLQELARKFTREEIIPVAAQYDKSGEYPWPIIKKAWELGLMNNHIPADIGGLDLDV 98
            ||.|::.|.::|..|.||:::.::|.||::|||||:||.|:|:|..||.||..||...||..|..
 Worm    22 SFELSDTQKEIQSHAIKFSKDVLVPNAAKFDKSGEFPWEIVKQAHSLGFMNTIIPEKYGGPGLSN 86

  Fly    99 FTTCLSAEELAYGCTGIMTALEASGLGQTPVILSGNKEQKKKYLGRLLEEPLVAAYCVTEPGAGS 163
            ..|.|..|.|:|||:|:..|:....|...|:.|||.:||||||||.|..||::|:||||||||||
 Worm    87 LDTALIVEALSYGCSGLQIAIFGPSLAAAPICLSGTEEQKKKYLGMLAAEPIIASYCVTEPGAGS 151

  Fly   164 DVSGIKTRAEKKGDEWVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKAFTGFIVERDSPGLT 228
            ||:|:||:|.|:|||::|||.|.|||.||.|.|:||||||:.:||.|..||||.|||:.|:||:|
 Worm   152 DVNGVKTKAVKQGDEYIINGSKAWITGGGHAKWFFVLARTDDNPKTPAGKAFTAFIVDGDTPGIT 216

  Fly   229 PGRKELNMGQRASDTRGITFEDVRVPKENVLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLD 293
            .|:||.|||||.||||.||||||||||||:|...|||||:|||.||.|||.|||.|||||.||||
 Worm   217 RGKKENNMGQRCSDTRSITFEDVRVPKENILGAPGAGFKVAMGAFDLTRPQVAASAVGLAWRCLD 281

  Fly   294 EALKYALERKTFGVPIAYHQAVQFMLADMAIGVETSRLAWRLSAWEIDQGRRNSYYASIAKCHAA 358
            |:.|||:||..||.|||.||.||||:|||||.:|.|||....:|.|:|....:||.||||||.||
 Worm   282 ESTKYAMERHAFGTPIANHQGVQFMIADMAINLELSRLFTYRAAAEVDSYGVSSYNASIAKCFAA 346

  Fly   359 DMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISRNMYE 413
            |.||..|::|.|||||.|||.|||||||||||||||||||||||||::|.|.:::
 Worm   347 DTANVAATNACQIFGGAGFNCEYPVEKLMRDAKIYQIYEGTSQIQRMVIGRTLFQ 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 CaiA 35..411 CDD:224871 235/375 (63%)
MCAD 37..414 CDD:173846 234/377 (62%)
acdh-8NP_495142.1 CaiA 21..400 CDD:224871 236/377 (63%)
ACAD 25..400 CDD:299127 234/374 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 212 1.000 Domainoid score I1615
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3
Inparanoid 1 1.050 493 1.000 Inparanoid score I770
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56625
OrthoDB 1 1.010 - - D281661at33208
OrthoFinder 1 1.000 - - FOG0005377
OrthoInspector 1 1.000 - - otm14066
orthoMCL 1 0.900 - - OOG6_101120
Panther 1 1.100 - - O PTHR48083
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3813
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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