DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and acdh-9

DIOPT Version :9

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_493832.1 Gene:acdh-9 / 173466 WormBaseID:WBGene00017874 Length:409 Species:Caenorhabditis elegans


Alignment Length:391 Identity:136/391 - (34%)
Similarity:216/391 - (55%) Gaps:15/391 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 NGTSFAL---------TEDQLQLQELARKFTREEIIPVAAQYDKSGEYPWPIIKKAWELGLMNNH 86
            |.:|:.|         .||.|   |.|.:|.::|:.|..|.:||.||.|..:::||.|:|....:
 Worm    15 NSSSYCLRPGVGLERDVEDVL---EAAHQFAKKEMYPKMADWDKQGELPMDVLRKAGEMGFGAIY 76

  Fly    87 IPADIGGLDLDVFTTCLSAEELAYGCTGIMTALEASGLGQTPVILSGNKEQKKKYLGRLLEEPLV 151
            ...|.||..|......:..|:|:.||......:....:....:...|.::.|:..|..:.....:
 Worm    77 CSGDHGGSGLSRLHASVIFEQLSMGCVSTAAYISIHNMCAWMLDTYGPEKLKEDLLPDMAVFKKL 141

  Fly   152 AAYCVTEPGAGSDVSGIKTRAEKKGDEWVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKAFT 216
            .:||:|||.||||.:.|:|.|.||||.:|:||.|.:|:..|.:|.|||:.|  .|...|.:|...
 Worm   142 GSYCLTEPDAGSDAASIRTTATKKGDYYVVNGSKAFISGAGTSNNYFVMMR--QDGAAPGAKGIF 204

  Fly   217 GFIVERDSPGLTPGRKELNMGQRASDTRGITFEDVRVPKENVLIGEGAGFKIAMGTFDKTRPPVA 281
            ..::|..:.|.:.|:||..:|..:..||.:||||.:||..|.:..:|.||.|||...:..|..:|
 Worm   205 CLMIEDGTEGFSYGKKEDKLGWNSQPTRILTFEDCKVPITNQIGKDGFGFNIAMAGLNGGRINIA 269

  Fly   282 AGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQFMLADMAIGVETSRLAWRLSAWEIDQGRRN 346
            :.::|.|||.:|.|:::...||.||..:|..|..||.||::|..:.||||..|.:|.::|.....
 Worm   270 SCSLGAAQRSMDLAIEHLKYRKQFGKSLADFQYNQFKLAELATKLYTSRLIVRNAAEQLDNDDPE 334

  Fly   347 SY-YASIAKCHAADMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISRN 410
            .. ..::||.||.|....:.:.|:|:|||.||..:|||::.:||.:::||.|||:::.||:|||:
 Worm   335 KVALCAMAKLHATDNCFDVVNGALQMFGGYGFLKDYPVQQYLRDIRVHQILEGTNEMMRLLISRD 399

  Fly   411 M 411
            :
 Worm   400 L 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 CaiA 35..411 CDD:224871 134/385 (35%)
MCAD 37..414 CDD:173846 134/385 (35%)
acdh-9NP_493832.1 CaiA 26..401 CDD:224871 133/380 (35%)
IBD 27..403 CDD:173851 133/379 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D281661at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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