DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and LOC1277470

DIOPT Version :10

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:XP_316942.4 Gene:LOC1277470 / 1277470 VectorBaseID:AGAMI1_009222 Length:430 Species:Anopheles gambiae


Alignment Length:439 Identity:124/439 - (28%)
Similarity:200/439 - (45%) Gaps:56/439 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FLNKLAAPALRQLVSQSRAYAAV----SHVSPNGTSF----------ALTEDQLQLQELARKFTR 53
            |.:::|  .|:.:.:..|...||    :..:..|.:|          .|.||::.:::..|.:..
Mosquito     7 FASRIA--QLKPITNHGRGIWAVRSCRAASTDKGPTFDWEDPLNLESQLKEDEIAIRDSFRAYCE 69

  Fly    54 EEIIPVAAQYDKSGEYPWPIIKKAWELGLMNNHIPADIGGLDLDVFTTCLSAEELAYGC------ 112
            ::::....:.::...:...|:::....|::.    ..|.|..      |.....:|||.      
Mosquito    70 DKLLSRVIEANRHEVFHKEIMQELGSFGVLG----CTIKGYG------CAGVSNVAYGLLTREVE 124

  Fly   113 ---TGIMTALEA-SGLGQTPVILSGNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTRA- 172
               :|..:|... |.|....:...|:..||:|||.||....|:..:.:|||..|||.|.::||| 
Mosquito   125 RIDSGYRSAFSVQSSLCMGAIYDYGSDAQKEKYLPRLARGELIGCFGLTEPNHGSDPSSMETRAV 189

  Fly   173 -EKKGDEWVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKAFTGFIVER--DSPGLTPGRKEL 234
             :.|...:|::|.|.||||..:|:...|..:|. |.|      ..||||:|  ...||...|.|.
Mosquito   190 HDPKTKTYVLSGSKTWITNSPIADICIVWGKTE-DGK------VRGFIVDRAESGEGLATPRIEG 247

  Fly   235 NMGQRASDTRGITFEDVRVPKENVLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYA 299
            ....|||.|..|..::||:|::| |:...:|.:...|..:..|..:|.||:|.|:.||..|..|.
Mosquito   248 KFSLRASATGMILMDEVRIPEDN-LLPNVSGMRGPFGCLNNARYGIAWGALGAAESCLKVARGYT 311

  Fly   300 LERKTFGVPIAYHQAVQFMLADM----AIGVETSRLAWRLSAWEIDQGRRNSYYASIAKCHAADM 360
            |:||.|..|:|.:|.:|..:|||    ::|:.......||.    ||........|:.|.:.|..
Mosquito   312 LDRKQFKKPLAANQLMQKKMADMLTEISLGLAACLHVGRLK----DQKLHTPEMISMLKRNNAGK 372

  Fly   361 ANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISR 409
            |..||..|..:.||||...||.:.:.:.:.:....||||..|..||:.|
Mosquito   373 ALDIARVARDMLGGNGIADEYHIIRHVMNLEAVNTYEGTHDIHALILGR 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 MCAD 37..414 CDD:173846 116/391 (30%)
LOC1277470XP_316942.4 None

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