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Protein Alignment Mcad and Acadl

DIOPT Version :9

Sequence 1:	NP_648149.1	Gene:	Mcad / 38864	FlyBaseID:	FBgn0035811	Length:	419	Species:	Drosophila melanogaster
Sequence 2:	NP_031407.2	Gene:	Acadl / 11363	MGIID:	87866	Length:	430	Species:	Mus musculus

Alignment Length:	371	Identity:	131/371 - (35%)
Similarity:	217/371 - (58%)	Gaps:	9/371 - (2%)

- Green bases have known domain annotations that are detailed below.

  Fly    45 QELARKFTREEIIPVAAQYDKSGEYPWPIIKKAWELGLMNNHIPADIGGLDLDVFTTCLSAEELA 109
            :|..|||.:||:||...:::|:||....:.:||.:.||:..:|....||:..|:.:|.::.||.|
Mouse    61 RESVRKFFQEEVIPHHTEWEKAGEVSREVWEKAGKQGLLGINIAEKHGGIGGDLLSTAVTWEEQA 125

  Fly   110 Y-GCTGIMTALEASGLGQTPVILS-GNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTRA 172
            | .|||...:|.:..:  .|.|.: |.|||.:|::.::.....:.|..:||||||||:.|::|.|
Mouse   126 YSNCTGPGFSLHSDIV--MPYIANYGTKEQIEKFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNA 188

  Fly   173 EKKGDEWVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKAFTGFIVERDSPGLTPGRKELNMG 237
            ::.|.:|::||.|::||||.:::...|:|.||.:.: .|:...:.|:||....|...|||...||
Mouse   189 KRSGSDWILNGSKVFITNGWLSDLVIVVAVTNREAR-SPAHGISLFLVENGMKGFIKGRKLHKMG 252

  Fly   238 QRASDTRGITFEDVRVPKENVLIG-EGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYALE 301
            .:|.||..:.|||||:| .|.|:| |..||...|....:.|..:|..|:...:...:|...|..:
Mouse   253 MKAQDTAELFFEDVRLP-ANALLGEENKGFYYLMQELPQERLLIAELAISACEFMFEETRNYVKQ 316

  Fly   302 RKTFGVPIAYHQAVQFMLADMAIGVETSRLAWRLSAWEIDQGRR-NSYYASIAKCHAADMANKIA 365
            ||.||..:|:.|.||..||::...:..:| |:..|..::.:.:| :|..||:||..|:::.|.:|
Mouse   317 RKAFGKTVAHIQTVQHKLAELKTHICVTR-AFVDSCLQLHETKRLDSGSASMAKYWASELQNSVA 380

  Fly   366 SDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISRNM 411
            .:.||:.||.|:..|||:.|...||::..||.||::|.:.:|:|.:
Mouse   381 YECVQLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIMKELIARQI 426

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.