DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and acad8

DIOPT Version :9

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:XP_002938027.1 Gene:acad8 / 100495757 XenbaseID:XB-GENE-955812 Length:414 Species:Xenopus tropicalis


Alignment Length:410 Identity:135/410 - (32%)
Similarity:225/410 - (54%) Gaps:12/410 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KLAAPALRQLVSQSRAYAAVSHVSPNGTSFALTEDQLQLQELARKFTREEIIPVAAQYDKSGEYP 70
            :|...|.:..:..||..|  |.:.|   |..|:|:|.:.|::|..|..:|:.|..|.:|:...:|
 Frog    14 RLKGAASQWTLPFSRRIA--SCIDP---SVGLSEEQKEFQKVAFDFAAKEMAPCMALWDEKEVFP 73

  Fly    71 WPIIKKAWELGLMNNHIPADIGGLDLDVFTTCLSAEELAYGCTGIMTALEASGLGQTPVILSGNK 135
            ...::||..||....:...|:||..|....|.:..|.|:.||......:....:....:...||:
 Frog    74 VETMRKAAHLGFGGIYAQTDVGGSGLSRLDTSIIFEALSTGCVSTTAYMSIHNMCVWMIDTYGNE 138

  Fly   136 EQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTRAEKKGDEWVINGQKMWITNGGVANWYFVL 200
            ||:.::...|......|:||:||||:|||.:.:.|.|::.||.:::||.|.:|:.||..:.|.|:
 Frog   139 EQRHQFCPSLCSMDKFASYCLTEPGSGSDAASLLTSAKRDGDYYILNGSKAFISGGGDTDVYVVM 203

  Fly   201 ARTNPDPKCPPSKAFTGFIVERDSPGLTPGRKELNMGQRASDTRGITFEDVRVPKENVLIGEGAG 265
            .||...    .::..:..:||:..|||:.|:||..:|..:..||.:.|||..||.:|.|..||.|
 Frog   204 CRTGGS----GARGISCLVVEKGIPGLSFGKKEKKVGWNSQPTRAVIFEDCVVPVKNRLGKEGQG 264

  Fly   266 FKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQFMLADMAIGVETSR 330
            |.|||...:..|..:|:.::|.|...:..|..:...||.||.|::::|.:||.|||||..:.|:|
 Frog   265 FSIAMKGLNGGRINIASCSLGAAHASVLLARDHLGVRKQFGEPLSHNQYLQFKLADMATRLVTAR 329

  Fly   331 LAWRLSAWEI--DQGRRNSYYASIAKCHAADMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIY 393
            |..|.:|..:  |.|...:..| :||..|.|...||.:.|:|:.||.|:..:|.|::.:||.:::
 Frog   330 LIVRHAAQALQNDTGDAATLCA-MAKLFATDECFKICNQALQMHGGYGYLKDYAVQQFVRDIRVH 393

  Fly   394 QIYEGTSQIQRLIISRNMYE 413
            ||.|||:::.|:|::|::.:
 Frog   394 QILEGTNEVMRMIVARSILQ 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 CaiA 35..411 CDD:224871 127/377 (34%)
MCAD 37..414 CDD:173846 127/379 (34%)
acad8XP_002938027.1 IBD 40..414 CDD:173851 127/379 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D281661at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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