DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcad and acad10

DIOPT Version :10

Sequence 1:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster
Sequence 2:XP_004910566.1 Gene:acad10 / 100036613 XenbaseID:XB-GENE-967980 Length:1059 Species:Xenopus tropicalis


Alignment Length:437 Identity:119/437 - (27%)
Similarity:201/437 - (45%) Gaps:50/437 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KLAAPAL--RQLVSQSRAYAAVSHVSPNGTSFALTEDQLQLQELARKFTREEIIPVAAQYD---- 64
            |.|.|.|  ..|.|.||....   :||:.    |:.:.|.|.:..::|.  |:...:|:.:    
 Frog   635 KTAFPTLPKASLYSSSRGGLI---LSPDD----LSGEALDLYQKLKQFI--EVYIYSAEQEFRNY 690

  Fly    65 KSGEYPW---PII----KKAWELGLMNNHIPADIGGLDLD---VFTTCLSAEELAYGCTGIMTAL 119
            :|.|..|   |:|    :||...||.|..:|     |:.|   .:...|:..|.|:.|..:.|:|
 Frog   691 QSSEKRWTPHPLIEDLKEKAKLQGLWNLFLP-----LESDPEGKYGARLTNMEYAHLCELMGTSL 750

  Fly   120 --------EASGLGQTPVILS-GNKEQKKKYLGRLLEEPLVAAYCVTEPG-AGSDVSGIKTRAEK 174
                    .|...|...|::. |.:|||:.:|..|||..:.:.:.:|||. |.||.:.||:..::
 Frog   751 YAPEIFNCSAPDTGNMEVLVRYGTEEQKELWLKPLLEGEIRSCFAMTEPQVASSDATNIKSSIKE 815

  Fly   175 KGDEWVINGQKMWITNGGV---ANWYFVLARTNPDPKCPPSKAFTGFIVERDSPG--LTPGRKEL 234
            .||.:::||.|.| |:|.:   ......:.:|:||  .|..|..|..::..|:.|  ||......
 Frog   816 DGDSYIVNGHKWW-TSGALDPRCKLCIFMGKTDPD--APRHKQQTMILIPMDTAGIKLTRPLTVY 877

  Fly   235 NMGQRASDTRGITFEDVRVPKENVLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYA 299
            .:....:....|.|::|||||||:|:|.|.||:||.|.....|.......||.|:|.|....:..
 Frog   878 GLDDAPAGHGEIQFDNVRVPKENILLGSGRGFEIAQGRLGPGRIHHCMRLVGNAERSLSLMKQRV 942

  Fly   300 LERKTFGVPIAYHQAVQFMLADMAIGVETSRLAWRLSAWEIDQ--GRRNSYYASIAKCHAADMAN 362
            ..|..||.|:.....:...:|.....:|.:||....:|..:|.  .::.:...|:.|..|..||.
 Frog   943 KSRIAFGKPLVEQGTILASIAQSRAEIEQARLLVLKAAHLMDTVGNKKAALEISLIKMVAPTMAY 1007

  Fly   363 KIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISR 409
            .:...|:|.||..|.:|::|:.:....|:..::.:|..::.:..:::
 Frog  1008 NVIDRAIQAFGAAGLSSDFPLAQFHAWARALRLADGPDEVHQAAVAK 1054

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McadNP_648149.1 MCAD 37..414 CDD:173846 109/404 (27%)
acad10XP_004910566.1 HAD-1A3-hyp 42..247 CDD:274054
PLN02876 257..1058 CDD:215473 119/437 (27%)
Blue background indicates that the domain is not in the aligned region.

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