DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-SD and PGLYRP1

DIOPT Version :9

Sequence 1:NP_648145.1 Gene:PGRP-SD / 38858 FlyBaseID:FBgn0035806 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_005082.1 Gene:PGLYRP1 / 8993 HGNCID:8904 Length:196 Species:Homo sapiens


Alignment Length:163 Identity:70/163 - (42%)
Similarity:96/163 - (58%) Gaps:2/163 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PIVTRAEWNAKPPNGAIDSMETPLPRAVIAHTAGGACADDVTCSQHMQNLQNFQMSKQKFSDIGY 85
            |||.|.||.|.....| ..:..||...|::||||.:|....:|.|..:|:|::.|....:.|:||
Human    32 PIVPRNEWKALASECA-QHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGY 95

  Fly    86 HYLIGGNGKVYEGRSPSQRGAFAGPN-NDGSLGIAFIGNFEERAPNKEALDAAKELLEQAVKQAQ 149
            ::|||.:|.|||||..:..||.:|.. |..|:||:|:||:.:|.|..:|:.||:.||...|.|..
Human    96 NFLIGEDGLVYEGRGWNFTGAHSGHLWNPMSIGISFMGNYMDRVPTPQAIRAAQGLLACGVAQGA 160

  Fly   150 LVEGYKLLGHRQVSATKSPGEALYALIQQWPNW 182
            |...|.|.|||.|..|.|||..||.|||.||::
Human   161 LRSNYVLKGHRDVQRTLSPGNQLYHLIQNWPHY 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-SDNP_648145.1 PGRP 20..162 CDD:128941 58/141 (41%)
PGLYRP1NP_005082.1 PGRP 31..173 CDD:128941 58/141 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165152326
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5479
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46811
OrthoDB 1 1.010 - - D1110472at2759
OrthoFinder 1 1.000 - - FOG0000842
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101717
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
87.620

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