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Protein Alignment PGRP-SD and Pglyrp1
DIOPT Version :9
Sequence 1: | NP_648145.1 |
Gene: | PGRP-SD / 38858 |
FlyBaseID: | FBgn0035806 |
Length: | 186 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_445825.1 |
Gene: | Pglyrp1 / 84387 |
RGDID: | 621429 |
Length: | 183 |
Species: | Rattus norvegicus |
Alignment Length: | 164 |
Identity: | 66/164 - (40%) |
Similarity: | 99/164 - (60%) |
Gaps: | 2/164 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 IVTRAEWNAKPPNGAIDSMETPLPRAVIAHTAGGACADDVTCSQHMQNLQNFQMSKQKFSDIGYH 86
:|.|:||.|. |:.....::.|:...||:||||..|:...:|.|..:|:|.:||.:..:.|:.|:
Rat 21 VVPRSEWKAL-PSECSKGLKKPVRYVVISHTAGSFCSSPDSCEQQARNVQLYQMKQLGWCDVAYN 84
Fly 87 YLIGGNGKVYEGRSPSQRGAFAGPN-NDGSLGIAFIGNFEERAPNKEALDAAKELLEQAVKQAQL 150
:|||.:|.|||||..:.:|...||. |..|:||.|:|::..|.|.|.||.||..||:..|.:..|
Rat 85 FLIGEDGHVYEGRGWTIKGDHTGPIWNPMSIGITFMGDYSHRVPAKRALRAALNLLKCGVSEGFL 149
Fly 151 VEGYKLLGHRQVSATKSPGEALYALIQQWPNWSE 184
...|::.|||.|.:|.|||:.||.:||.|.::.|
Rat 150 RSNYEVKGHRDVQSTLSPGDQLYEIIQSWDHYRE 183
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SD | NP_648145.1 |
PGRP |
20..162 |
CDD:128941 |
55/140 (39%) |
Pglyrp1 | NP_445825.1 |
PGRP |
21..161 |
CDD:128941 |
55/140 (39%) |
Information from Original Tools:
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