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Protein Alignment PGRP-SD and pglyrp1-like.1
DIOPT Version :9
Sequence 1: | NP_648145.1 |
Gene: | PGRP-SD / 38858 |
FlyBaseID: | FBgn0035806 |
Length: | 186 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001025626.1 |
Gene: | pglyrp1-like.1 / 595014 |
XenbaseID: | XB-GENE-5778936 |
Length: | 182 |
Species: | Xenopus tropicalis |
Alignment Length: | 186 |
Identity: | 76/186 - (40%) |
Similarity: | 104/186 - (55%) |
Gaps: | 10/186 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MTWIGLLIVGLTAIAVQGEVPIVTRAEWNAKPPNGAIDSMETPLPRAV----IAHTAGGACADDV 61
|.|:.:.:....|:| ||...|::|:.|...| ...:..|||:| |.||||.:|..:.
Frog 1 MMWVFIFLTAFCALA-QGCPKIISRSSWGGVP-----SKCQAKLPRSVKYVIIHHTAGASCNSES 59
Fly 62 TCSQHMQNLQNFQMSKQKFSDIGYHYLIGGNGKVYEGRSPSQRGAFAGPNNDGSLGIAFIGNFEE 126
.|....:|:|||.|....:.|.||::|||.:|:|||||.....||.|...|..|:||:|:|.|..
Frog 60 ACKAQARNIQNFHMKSNGWCDTGYNFLIGEDGQVYEGRGWETVGAHAKNYNFNSIGISFMGTFTN 124
Fly 127 RAPNKEALDAAKELLEQAVKQAQLVEGYKLLGHRQVSATKSPGEALYALIQQWPNW 182
||||..|..|||:|:...|.:..:...|.|.|||.||||:.||..||.||:.|||:
Frog 125 RAPNTAAQKAAKDLISCGVAKKVINSDYTLKGHRDVSATECPGTNLYNLIKNWPNF 180
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SD | NP_648145.1 |
PGRP |
20..162 |
CDD:128941 |
57/145 (39%) |
pglyrp1-like.1 | NP_001025626.1 |
PGRP |
19..160 |
CDD:128941 |
57/145 (39%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG46811 |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.920 |
|
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