DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-SD and pglyrp2

DIOPT Version :10

Sequence 1:NP_648145.1 Gene:PGRP-SD / 38858 FlyBaseID:FBgn0035806 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001038631.1 Gene:pglyrp2 / 568634 ZFINID:ZDB-GENE-071227-1 Length:458 Species:Danio rerio


Alignment Length:168 Identity:58/168 - (34%)
Similarity:91/168 - (54%) Gaps:4/168 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 IVTRAEWNAKPPNGAIDSMETPLPRAVIAHTA--GGACADDVTCSQHMQNLQNFQMSKQKFSDIG 84
            |:.|..|.|.||...::.:..|:....|.|||  ...|.:..||||:|:.:|.|......:.|||
Zfish   287 IIPRCIWGAAPPQVPLELLSPPMSFLYIHHTAIPSKPCLNLQTCSQNMRAMQRFHQKDWGWYDIG 351

  Fly    85 YHYLIGGNGKVYEGRSPSQRGAFAGPNNDGSLGIAFIGNFEERAPNKEALDAAK-ELLEQAVKQA 148
            |.:::|.:|.:||||....:||.....|:...|:||||::..|.|:...::..: .|::..|...
Zfish   352 YSFVVGSDGYIYEGRGWMSQGAHTKGRNNVGYGVAFIGDYSGRLPSTHDMELVRHHLVKCGVNNG 416

  Fly   149 QLVEGYKLLGHRQVSATKS-PGEALYALIQQWPNWSEE 185
            .|.|.:.:||||||..|.| ||.|||:.|..|.::.::
Zfish   417 FLQEDFTILGHRQVVVTTSCPGNALYSEITTWMHYKDK 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-SDNP_648145.1 PGRP 20..162 CDD:128941 47/142 (33%)
pglyrp2NP_001038631.1 PGRP 285..430 CDD:128941 47/142 (33%)

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