DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-SD and PGRP-SB1

DIOPT Version :9

Sequence 1:NP_648145.1 Gene:PGRP-SD / 38858 FlyBaseID:FBgn0035806 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_648917.1 Gene:PGRP-SB1 / 39870 FlyBaseID:FBgn0043578 Length:190 Species:Drosophila melanogaster


Alignment Length:186 Identity:70/186 - (37%)
Similarity:109/186 - (58%) Gaps:18/186 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLIVGLTAIAVQGEVPIVTRAEW---NAKPP---NGAIDSMETPLPRAVIAHTAG-GACADDVTC 63
            |..:.|:|.|:|    |..|:.|   :|:.|   :||:|.:       :|.|:.. ..|:....|
  Fly    15 LCCLALSANALQ----IEPRSSWGAVSARSPSRISGAVDYV-------IIHHSDNPNGCSTSEQC 68

  Fly    64 SQHMQNLQNFQMSKQKFSDIGYHYLIGGNGKVYEGRSPSQRGAFAGPNNDGSLGIAFIGNFEERA 128
            .:.::|:|:....::.||||||::::.|:|||||||....:|:.:...|..|:||.||||||..|
  Fly    69 KRMIKNIQSDHKGRRNFSDIGYNFIVAGDGKVYEGRGFGLQGSHSPNYNRKSIGIVFIGNFERSA 133

  Fly   129 PNKEALDAAKELLEQAVKQAQLVEGYKLLGHRQVSATKSPGEALYALIQQWPNWSE 184
            |:.:.|..||:|:|.|.::..|.:.|.|.||||..||..||:|||..|:.||:|.:
  Fly   134 PSAQMLQNAKDLIELAKQRGYLKDNYTLFGHRQTKATSCPGDALYNEIKTWPHWRQ 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-SDNP_648145.1 PGRP 20..162 CDD:128941 53/148 (36%)
PGRP-SB1NP_648917.1 PGRP 25..167 CDD:128941 54/152 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440269
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1110472at2759
OrthoFinder 1 1.000 - - FOG0000842
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11022
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.950

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