powered by:
Protein Alignment PGRP-SD and PGRP-SB1
DIOPT Version :9
Sequence 1: | NP_648145.1 |
Gene: | PGRP-SD / 38858 |
FlyBaseID: | FBgn0035806 |
Length: | 186 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_648917.1 |
Gene: | PGRP-SB1 / 39870 |
FlyBaseID: | FBgn0043578 |
Length: | 190 |
Species: | Drosophila melanogaster |
Alignment Length: | 186 |
Identity: | 70/186 - (37%) |
Similarity: | 109/186 - (58%) |
Gaps: | 18/186 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 LLIVGLTAIAVQGEVPIVTRAEW---NAKPP---NGAIDSMETPLPRAVIAHTAG-GACADDVTC 63
|..:.|:|.|:| |..|:.| :|:.| :||:|.: :|.|:.. ..|:....|
Fly 15 LCCLALSANALQ----IEPRSSWGAVSARSPSRISGAVDYV-------IIHHSDNPNGCSTSEQC 68
Fly 64 SQHMQNLQNFQMSKQKFSDIGYHYLIGGNGKVYEGRSPSQRGAFAGPNNDGSLGIAFIGNFEERA 128
.:.::|:|:....::.||||||::::.|:|||||||....:|:.:...|..|:||.||||||..|
Fly 69 KRMIKNIQSDHKGRRNFSDIGYNFIVAGDGKVYEGRGFGLQGSHSPNYNRKSIGIVFIGNFERSA 133
Fly 129 PNKEALDAAKELLEQAVKQAQLVEGYKLLGHRQVSATKSPGEALYALIQQWPNWSE 184
|:.:.|..||:|:|.|.::..|.:.|.|.||||..||..||:|||..|:.||:|.:
Fly 134 PSAQMLQNAKDLIELAKQRGYLKDNYTLFGHRQTKATSCPGDALYNEIKTWPHWRQ 189
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SD | NP_648145.1 |
PGRP |
20..162 |
CDD:128941 |
53/148 (36%) |
PGRP-SB1 | NP_648917.1 |
PGRP |
25..167 |
CDD:128941 |
54/152 (36%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45440269 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR11022 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.950 |
|
Return to query results.
Submit another query.