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Protein Alignment PGRP-SD and PGRP-SA
DIOPT Version :9
Sequence 1: | NP_648145.1 |
Gene: | PGRP-SD / 38858 |
FlyBaseID: | FBgn0035806 |
Length: | 186 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001285128.1 |
Gene: | PGRP-SA / 32099 |
FlyBaseID: | FBgn0030310 |
Length: | 203 |
Species: | Drosophila melanogaster |
Alignment Length: | 188 |
Identity: | 73/188 - (38%) |
Similarity: | 105/188 - (55%) |
Gaps: | 11/188 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 IGLLIVGLTAIAVQGE---------VPIVTRAEWNAKPPNGAIDSMETPLPRAVIAHTAGGACAD 59
|||::: |.|....|: ..|..:.:|..||..| :.....|:...||.||..|.|:.
Fly 14 IGLVLL-LLAFVSAGKSRQRSPANCPTIKLKRQWGGKPSLG-LHYQVRPIRYVVIHHTVTGECSG 76
Fly 60 DVTCSQHMQNLQNFQMSKQKFSDIGYHYLIGGNGKVYEGRSPSQRGAFAGPNNDGSLGIAFIGNF 124
.:.|::.:||:|.:..::..|:||.|::|||.:|.||||.....|||.....|....||||||||
Fly 77 LLKCAEILQNMQAYHQNELDFNDISYNFLIGNDGIVYEGTGWGLRGAHTYGYNAIGTGIAFIGNF 141
Fly 125 EERAPNKEALDAAKELLEQAVKQAQLVEGYKLLGHRQVSATKSPGEALYALIQQWPNW 182
.::.|:..||.|||:||...|:|.:|.|.|.|:...||.:|:|||..||..||:||:|
Fly 142 VDKLPSDAALQAAKDLLACGVQQGELSEDYALIAGSQVISTQSPGLTLYNEIQEWPHW 199
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SD | NP_648145.1 |
PGRP |
20..162 |
CDD:128941 |
54/141 (38%) |
PGRP-SA | NP_001285128.1 |
PGRP |
38..179 |
CDD:128941 |
54/141 (38%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45440249 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5479 |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
1 |
0.950 |
- |
0 |
Normalized mean entropy |
S7191 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101717 |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR11022 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
8 | 7.700 |
|
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