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Protein Alignment PGRP-SD and Pglyrp2
DIOPT Version :9
Sequence 1: | NP_648145.1 |
Gene: | PGRP-SD / 38858 |
FlyBaseID: | FBgn0035806 |
Length: | 186 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038935975.1 |
Gene: | Pglyrp2 / 299567 |
RGDID: | 1359183 |
Length: | 522 |
Species: | Rattus norvegicus |
Alignment Length: | 162 |
Identity: | 54/162 - (33%) |
Similarity: | 88/162 - (54%) |
Gaps: | 3/162 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 25 RAEWNAKPPNGAIDSMETPLPRAVIAHTAGGA--CADDVTCSQHMQNLQNFQMSKQKFSDIGYHY 87
|..|.|.|..|....:..||....:.||...| |....:|:..|:::|.|..:.:.::||||.:
Rat 357 RCRWGAAPYRGHPTPLRLPLGLLYVHHTYVPAPPCTTFQSCAADMRSMQRFHQNVRGWADIGYSF 421
Fly 88 LIGGNGKVYEGRSPSQRGAFAGPNNDGSLGIAFIGNFEERAPNKEALDAAKELLEQ-AVKQAQLV 151
::|.:|.||:||.....||.....|....|:||:||:....|::.||:..:::|.. |::...|.
Rat 422 VVGSDGYVYQGRGWHWVGAHTLGYNSRGFGVAFVGNYTGSLPSEAALNTVRDVLPSCAIRAGLLR 486
Fly 152 EGYKLLGHRQVSATKSPGEALYALIQQWPNWS 183
..|||.||||:..|..||.||:.|::.||:::
Rat 487 PDYKLFGHRQLGKTDCPGNALFNLLRTWPHFT 518
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SD | NP_648145.1 |
PGRP |
20..162 |
CDD:128941 |
45/139 (32%) |
Pglyrp2 | XP_038935975.1 |
PGRP |
352..497 |
CDD:128941 |
45/139 (32%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166345854 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101717 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.750 |
|
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