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Protein Alignment PGRP-SD and Pglyrp3
DIOPT Version :9
Sequence 1: | NP_648145.1 |
Gene: | PGRP-SD / 38858 |
FlyBaseID: | FBgn0035806 |
Length: | 186 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006501534.1 |
Gene: | Pglyrp3 / 242100 |
MGIID: | 2685266 |
Length: | 359 |
Species: | Mus musculus |
Alignment Length: | 170 |
Identity: | 66/170 - (38%) |
Similarity: | 99/170 - (58%) |
Gaps: | 8/170 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 EVP------IVTRAEWNAKPPNGAIDSMETPLPRAVIAHTAGGACADDVTCSQHMQNLQNFQMSK 77
|:| |..|:.|.|:..: ...|..|....:|.||||.:|.:...|...:::.|:|.:..
Mouse 190 EIPKKACPNITPRSAWEARETH--CPQMNLPAKFVIIIHTAGKSCNESADCLVRVRDTQSFHIDN 252
Fly 78 QKFSDIGYHYLIGGNGKVYEGRSPSQRGAFAGPNNDGSLGIAFIGNFEERAPNKEALDAAKELLE 142
|.|.||.||:|:|.:|:||||...:..|:.....||.:|||||:|||.|:.||:.:|.||:.|::
Mouse 253 QDFCDIAYHFLVGQDGEVYEGVGWNIEGSHTYGYNDIALGIAFMGNFVEKPPNEASLKAAQSLIQ 317
Fly 143 QAVKQAQLVEGYKLLGHRQVSATKSPGEALYALIQQWPNW 182
.||.:..|...|.|:||..||...|||:|||.:|:.||::
Mouse 318 CAVAKGYLTSNYLLMGHSDVSNILSPGQALYNIIKTWPHF 357
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SD | NP_648145.1 |
PGRP |
20..162 |
CDD:128941 |
54/147 (37%) |
Pglyrp3 | XP_006501534.1 |
PGRP |
40..172 |
CDD:128941 |
|
PGRP |
197..337 |
CDD:128941 |
53/141 (38%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C167842403 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5479 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
1 |
0.950 |
- |
0 |
Normalized mean entropy |
S7191 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101717 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
6 | 5.550 |
|
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