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Protein Alignment PGRP-SD and PGLYRP3
DIOPT Version :9
Sequence 1: | NP_648145.1 |
Gene: | PGRP-SD / 38858 |
FlyBaseID: | FBgn0035806 |
Length: | 186 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_011507420.1 |
Gene: | PGLYRP3 / 114771 |
HGNCID: | 30014 |
Length: | 377 |
Species: | Homo sapiens |
Alignment Length: | 161 |
Identity: | 66/161 - (40%) |
Similarity: | 95/161 - (59%) |
Gaps: | 2/161 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 IVTRAEWNAKPPNGAIDSMETPLPRAVIAHTAGGACADDVTCSQHMQNLQNFQMSKQKFSDIGYH 86
|:.|:.|.|:..: ...|..|....:|.||||.:|.....|...::|:|:|.|..:.|.|||||
Human 217 IIKRSAWEARETH--CPKMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFCDIGYH 279
Fly 87 YLIGGNGKVYEGRSPSQRGAFAGPNNDGSLGIAFIGNFEERAPNKEALDAAKELLEQAVKQAQLV 151
:|:|.:|.||||.....:|:.....||.:|||||||.|.|:.||..||:||::|::.||.:..|.
Human 280 FLVGQDGGVYEGVGWHIQGSHTYGFNDIALGIAFIGYFVEKPPNAAALEAAQDLIQCAVVEGYLT 344
Fly 152 EGYKLLGHRQVSATKSPGEALYALIQQWPNW 182
..|.|:||..|....|||:|||.:|..||::
Human 345 PNYLLMGHSDVVNILSPGQALYNIISTWPHF 375
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SD | NP_648145.1 |
PGRP |
20..162 |
CDD:128941 |
56/139 (40%) |
PGLYRP3 | XP_011507420.1 |
PGRP |
57..195 |
CDD:128941 |
|
PGRP |
215..355 |
CDD:128941 |
56/139 (40%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C165152336 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
1 |
0.950 |
- |
0 |
Normalized mean entropy |
S7191 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101717 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.700 |
|
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