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Protein Alignment PGRP-SD and pglyrp2
DIOPT Version :9
Sequence 1: | NP_648145.1 |
Gene: | PGRP-SD / 38858 |
FlyBaseID: | FBgn0035806 |
Length: | 186 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001106487.2 |
Gene: | pglyrp2 / 100127677 |
XenbaseID: | XB-GENE-5779913 |
Length: | 497 |
Species: | Xenopus tropicalis |
Alignment Length: | 166 |
Identity: | 56/166 - (33%) |
Similarity: | 84/166 - (50%) |
Gaps: | 3/166 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 IVTRAEWNAKPPNGAIDSMETPLPRAVIAHT--AGGACADDVTCSQHMQNLQNFQMSKQKFSDIG 84
::.|..|.||...|....:..||.|..|.|| ....|.....|:.:|:::|.|....:.:.|||
Frog 331 VIPRCMWGAKRYKGKPIFLGLPLSRVFIHHTYEPSQPCTSFSQCAANMRSMQRFHQQDRGWDDIG 395
Fly 85 YHYLIGGNGKVYEGRSPSQRGAFAGPNNDGSLGIAFIGNFEERAPNKEALDAAKE-LLEQAVKQA 148
|.:::|.||.:||||..::.||.....|....|::|||::....|....|...|: .|..||:..
Frog 396 YSFVVGSNGYLYEGRGWNRAGAHTRGYNSVGYGVSFIGDYTSIVPKDSILALVKDRFLRCAVRLG 460
Fly 149 QLVEGYKLLGHRQVSATKSPGEALYALIQQWPNWSE 184
.:...|.:.|||||.:|..||:|||..||.|.::.|
Frog 461 YITPNYIIQGHRQVVSTSCPGDALYKEIQSWDHFKE 496
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SD | NP_648145.1 |
PGRP |
20..162 |
CDD:128941 |
44/142 (31%) |
pglyrp2 | NP_001106487.2 |
PGRP |
329..474 |
CDD:128941 |
44/142 (31%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.920 |
|
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