DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42729 and obst-H

DIOPT Version :10

Sequence 1:NP_001034019.2 Gene:CG42729 / 3885667 FlyBaseID:FBgn0261682 Length:185 Species:Drosophila melanogaster
Sequence 2:NP_001034020.1 Gene:obst-H / 39681 FlyBaseID:FBgn0053983 Length:269 Species:Drosophila melanogaster


Alignment Length:257 Identity:52/257 - (20%)
Similarity:83/257 - (32%) Gaps:101/257 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWQLLIVLACLLPGYLW-VQVQAVFLEECKGVIINKVTNENQECSEFVHCDGDDSYYCNGDCREA 64
            |.:.||.|..:|   || .::.|...:||.|:.........:.|..:|:|:|::|  ..|||.:.
  Fly     1 MSKYLIHLCLVL---LWSSRINADHFDECDGMDDGAFVQSWESCQSYVYCEGEES--LKGDCEDG 60

  Fly    65 ---------------VECYTNVVTTPVTTLRPIGTSTERAPSAEPVNTTSTTLATTTPTTIAVTT 114
                           |.|:.:.|..|            ..|..|.........||..||...:..
  Fly    61 EYFDSEAGTCDIAANVSCFLDEVDEP------------SDPEPETDEEEEEIPATPRPTEPPIVE 113

  Fly   115 TTSQVPSTDV----------------------------YVIC-----------------KTSGR- 133
            |.::|...::                            |.:|                 ..:|: 
  Fly   114 TPTEVDIINIAPVVRPNCPISDDPGQVIFMASNNSCTNYYLCYHGHAMEMHCDNELYFNSLTGQC 178

  Fly   134 ----------------------NGVYPYPANSNYYYQCISGYLLLQQCPQNFHFDVAQGQCV 173
                                  ...:|:|.|.||:|.||.|:|.|||||..:.:|:.:..||
  Fly   179 DYPDKVQCAFEDPRSHKCLPHMTEFFPHPDNCNYFYYCIKGFLTLQQCPFYYGWDIERRSCV 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42729NP_001034019.2 CBM_14 134..173 CDD:426342 16/38 (42%)
obst-HNP_001034020.1 CBM_14 26..77 CDD:426342 10/52 (19%)
CBM_14 142..184 CDD:426342 3/41 (7%)
ChtBD2 203..240 CDD:214696 16/36 (44%)

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