Protein Alignment CG34031 and nanog

DIOPT Version :10

• Sequence 1: NP_001246894.1
• Gene: CG34031 / 3885665
• FlyBaseID: FBgn0054031
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: NP_001091862.1
• Gene: nanog / 792333
• ZFINID: ZDB-GENE-030131-5486
• Length: 384
• Species: Danio rerio
• Alignment Length: 193
• Identity: 56/193 - (29%)
• Similarity: 78/193 - (40%)
• Gaps: 44/193 - (22%)

  Fly    38 STSEAH--------SSQNSLPKDNTNVTS---SDISKLYAFSFTQEGNNKTPLTNFDLCQG-HPR 90
            |.||||        ||:..:|..|.|:.|   .|..       |..|:..:...|.....| .|.
Zfish   112 SDSEAHTPDSWSSASSREGVPLTNLNLPSWRDRDYE-------TDSGSPDSGERNLTSTAGEEPV 169

  Fly    91 RLPITFDGSTVSRFVWRTESILPSYITNSTNLQEKQLRKRFTDRKPRQAYSASQLERLENEFNLD 155
            .|.:..|          |:..||:       |....:|.....||.|.|:|..|:..|.|.||:.
Zfish   170 NLNLGVD----------TQPPLPA-------LTASPVRPPTLPRKTRAAFSEEQMNALVNRFNVQ 217

  Fly   156 KYLSVSKRVELSKSLSLTEVQVKTWFQNRRTKWKKQLTSRLKIAHRHGLWIPTLPITTIIPNT 218
            :||:.::...|:.:..||..||||||||||.|.|:.        .|...|:....:...:|||
Zfish   218 RYLTPAEMKTLAGATGLTYKQVKTWFQNRRMKLKRH--------QRDSSWMTERYVVNAVPNT 272

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34031	NP_001246894.1	Homeodomain	134..190	CDD:459649	26/55 (47%)
nanog	NP_001091862.1	Homeodomain	196..252	CDD:459649	26/55 (47%)