DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34031 and lbx1a

DIOPT Version :9

Sequence 1:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001020703.1 Gene:lbx1a / 564103 ZFINID:ZDB-GENE-040724-40 Length:269 Species:Danio rerio


Alignment Length:185 Identity:53/185 - (28%)
Similarity:71/185 - (38%) Gaps:53/185 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LGAFSIDSILSTSEAHSSQNSLPKDNTNVTSSDISKLYAFSFTQ---EGNNKTPLTNFDLCQGHP 89
            |..|||:.||:                   ...:.:.|....|.   ....|.|.|      |||
Zfish    33 LTPFSIEDILN-------------------KPSVKRSYTICGTAHLLSSGEKHPST------GHP 72

  Fly    90 ---RRL-----PI---------TFDGSTVSRFVWRTESILPSYITNSTNLQEKQLRKRFTDRKPR 137
               |.|     |:         ||.|..|| .:...|......:....|..:|:       ||.|
Zfish    73 LSNRALLTQTSPLCALEELASKTFKGLEVS-VLQAAEGRDGMTLFGQRNTPKKR-------RKSR 129

  Fly   138 QAYSASQLERLENEFNLDKYLSVSKRVELSKSLSLTEVQVKTWFQNRRTKWKKQL 192
            .|::..|:..||..|...||||.:.|.::::.|.||..||.|||||||.|.|:.|
Zfish   130 TAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDL 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34031NP_001246894.1 Homeobox 136..189 CDD:278475 24/52 (46%)
lbx1aNP_001020703.1 Homeobox 128..181 CDD:278475 24/52 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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