DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34031 and nkx3-1

DIOPT Version :9

Sequence 1:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001373254.1 Gene:nkx3-1 / 555375 ZFINID:ZDB-GENE-081104-238 Length:185 Species:Danio rerio


Alignment Length:169 Identity:49/169 - (28%)
Similarity:75/169 - (44%) Gaps:45/169 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 KLGAFSIDSILSTSEAHSSQNSLPKDNTNVTSSDISKLYAFSFTQEGNNKTPLTNFDLCQGHPRR 91
            :|.:|.|:.|||..|....::|...::....|:|                ....:.|.|:     
Zfish     7 QLTSFFIEDILSLKEDKKDEDSCNAESDRDDSTD----------------RQTDSADTCR----- 50

  Fly    92 LPITFDGSTVSRFVWRTESILPSYITNSTNLQEKQLRKRFTDRKPRQAYSASQLERLENEFNLDK 156
               |.:|.|||                ||.:.....:|    ::.|.|::..|:..||.:|:..:
Zfish    51 ---TSEGKTVS----------------STEMTGGGGKK----KRSRAAFTHLQVLELEKKFSRQR 92

  Fly   157 YLSVSKRVELSKSLSLTEVQVKTWFQNRRTKWK-KQLTS 194
            |||..:|..|:.:|.|||.|||.||||||.|.| :|||:
Zfish    93 YLSAPERTHLASALHLTETQVKIWFQNRRYKTKRRQLTT 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34031NP_001246894.1 Homeobox 136..189 CDD:278475 25/52 (48%)
nkx3-1NP_001373254.1 COG5576 15..>136 CDD:227863 46/161 (29%)
Homeobox 72..126 CDD:395001 25/53 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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