DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34031 and barhl1b

DIOPT Version :10

Sequence 1:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001018142.1 Gene:barhl1b / 553186 ZFINID:ZDB-GENE-060118-2 Length:323 Species:Danio rerio


Alignment Length:182 Identity:50/182 - (27%)
Similarity:80/182 - (43%) Gaps:59/182 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 TKKKGKLGAFSIDSILSTSEAHSSQNSLPKDNTNVTSSDISKLYAFSFTQEGNNKTPLTNFDLCQ 86
            |::.|:|.:...|.::....::||.:|                 .:...:||:.:          
Zfish   122 TQEAGRLASKIADDLIEKIHSNSSSDS-----------------EYKVKEEGDRE---------- 159

  Fly    87 GHPRRLPITFDGSTVSRFVWRTESILPSYITNSTNLQEKQLRKRFTDRKPRQAYSASQLERLENE 151
                                         |::|.:..:.:|:|   .||.|.|::..||.:||..
Zfish   160 -----------------------------ISSSRDSPQVRLKK---PRKARTAFTDHQLAQLERS 192

  Fly   152 FNLDKYLSVSKRVELSKSLSLTEVQVKTWFQNRRTKWKKQLTSRLKIAHRHG 203
            |...|||||..|:||:.||:||:.|||||:||||||||:|....|::....|
Zfish   193 FERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAG 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34031NP_001246894.1 Homeodomain 134..190 CDD:459649 33/55 (60%)
barhl1bNP_001018142.1 Homeodomain 175..231 CDD:459649 33/55 (60%)

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