DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34031 and ved

DIOPT Version :9

Sequence 1:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_898897.1 Gene:ved / 368201 ZFINID:ZDB-GENE-030813-1 Length:278 Species:Danio rerio


Alignment Length:198 Identity:51/198 - (25%)
Similarity:83/198 - (41%) Gaps:39/198 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNPHLEQDKSRLNSCIEKSIQTKKKGKLGAFSIDSILSTSEAHSSQNSLPKDNTNVTSSDISKLY 65
            |..|:|:..:.     ||.:|.|...|.          ..|.::.:..:|:..|.  ...|.|  
Zfish    43 MEKHMEEKYTE-----EKYLQEKSMEKF----------MHEKYTEEKHMPEKYTE--GKRIQK-- 88

  Fly    66 AFSFTQEGNNKTPLTNFDL--CQGHPRRLPITFDGSTVSRFVWRTESILPSYITNSTNLQEKQLR 128
               .|.|....:...:.:|  |:....|    .:||. ||......|:.|:..:.|.:       
Zfish    89 ---HTHESGFSSSTEDEELSGCESEGSR----SEGSG-SRSPAAPGSVAPASGSGSPS------- 138

  Fly   129 KRFTDRKPRQAYSASQLERLENEFNLDKYLSVSKRVELSKSLSLTEVQVKTWFQNRRTKWKKQLT 193
               :.|:||.|:|:.|:..||..|..:.||....:.||.::|.||:.|::.||||||.|.|:.:.
Zfish   139 ---SGRRPRTAFSSEQISSLERVFKRNAYLGAQDKAELCRTLKLTDKQIRNWFQNRRMKLKRTVQ 200

  Fly   194 SRL 196
            ..|
Zfish   201 DSL 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34031NP_001246894.1 Homeobox 136..189 CDD:278475 23/52 (44%)
vedNP_898897.1 Homeobox 145..196 CDD:278475 21/50 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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