DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34031 and HOXD8

DIOPT Version :9

Sequence 1:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_062458.1 Gene:HOXD8 / 3234 HGNCID:5139 Length:290 Species:Homo sapiens


Alignment Length:136 Identity:46/136 - (33%)
Similarity:63/136 - (46%) Gaps:38/136 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 CQGHP---------RRLPITFDGSTVSRFVWRTESIL---PSYITNSTNLQEKQ----------- 126
            |.|.|         :|.||         |..:.|:.|   |...::|.|:.|..           
Human   129 CHGEPAKFYGYDNLQRQPI---------FTTQQEAELVQYPDCKSSSGNIGEDPDHLNQSSSPSQ 184

  Fly   127 ----LRKRFTD--RKPRQAYSASQLERLENEFNLDKYLSVSKRVELSKSLSLTEVQVKTWFQNRR 185
                :|.:...  |:.||.||..|...||.||..:.||:..:|:|:|.:|:|||.|||.||||||
Human   185 MFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRR 249

  Fly   186 TKWKKQ 191
            .||||:
Human   250 MKWKKE 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34031NP_001246894.1 Homeobox 136..189 CDD:278475 28/52 (54%)
HOXD8NP_062458.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..127
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..200 5/38 (13%)
Homeobox 201..253 CDD:278475 28/51 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..290 0/1 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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