DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34031 and rx1

DIOPT Version :9

Sequence 1:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_571300.2 Gene:rx1 / 30472 ZFINID:ZDB-GENE-990415-236 Length:330 Species:Danio rerio


Alignment Length:209 Identity:56/209 - (26%)
Similarity:85/209 - (40%) Gaps:36/209 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 HLEQDKSRL--NSCIEKS---IQTKKKGKL---GAFSIDSILSTSEAHSSQNSLPKDNTNVTSSD 60
            ||..|...:  :||:..|   ...|..|.:   ...|||.||..::   .|:||.....|..:  
Zfish     2 HLSLDTMNMVDDSCLSPSNFHDMVKAGGAVVGTRVHSIDVILGFNK---DQDSLLNPGANAVA-- 61

  Fly    61 ISKLYAFSFTQEGNNKTPLTNFDLCQGHPRRLPITFDGSTVSRF-------------VWRTESIL 112
             .|:...|..:.|.....:..:    ||   ||...|||....|             :......:
Zfish    62 -HKVGGESLGEPGKLDQRVQPY----GH---LPPLRDGSEQPTFHDADMFSNKCDGDLGDLRKAI 118

  Fly   113 PSYITNSTNLQEKQLRKRFTDRKPRQAYSASQLERLENEFNLDKYLSVSKRVELSKSLSLTEVQV 177
            .|...:..:...:|.:|:  .|:.|..::..||..||..|....|..|..|.||:..::|.||:|
Zfish   119 ESDSKSPDSADGEQPKKK--HRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRV 181

  Fly   178 KTWFQNRRTKWKKQ 191
            :.||||||.||::|
Zfish   182 QVWFQNRRAKWRRQ 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34031NP_001246894.1 Homeobox 136..189 CDD:278475 22/52 (42%)
rx1NP_571300.2 Octapeptide motif 37..44 4/6 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 66..104 10/44 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 118..142 4/25 (16%)
Homeobox 141..193 CDD:278475 22/51 (43%)
OAR 302..318 CDD:281777
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 306..319
Nuclear localization signal. /evidence=ECO:0000255 312..316
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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